RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 MUC12Q9UKN1 5478 aa7.69□□□□□ -1.18
NHLH1-201ENST00000302101 KRTAP9-6A8MVA2 160 aa7.68□□□□□ -1.18
NHLH1-201ENST00000302101 SYNE2Q8WXH0 6885 aaKnown RBP7.67□□□□□ -1.18
NHLH1-201ENST00000302101 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
NHLH1-201ENST00000302101 KRTAP19-4Q3LI73 84 aa7.62□□□□□ -1.19
NHLH1-201ENST00000302101 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
NHLH1-201ENST00000302101 KRTAP19-3Q7Z4W3 81 aa7.57□□□□□ -1.2
NHLH1-201ENST00000302101 MT1GP13640 62 aa7.5□□□□□ -1.21
NHLH1-201ENST00000302101 KRTAP5-9P26371 169 aa7.5□□□□□ -1.21
NHLH1-201ENST00000302101 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.21
NHLH1-201ENST00000302101 MT1MQ8N339 61 aa7.44□□□□□ -1.22
NHLH1-201ENST00000302101 LCE5AQ5TCM9 118 aa7.42□□□□□ -1.22
NHLH1-201ENST00000302101 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
NHLH1-201ENST00000302101 KRTAP4-3Q9BYR4 195 aa7.39□□□□□ -1.23
NHLH1-201ENST00000302101 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
NHLH1-201ENST00000302101 KRTAP2-1Q9BYU5 128 aa7.39□□□□□ -1.23
NHLH1-201ENST00000302101 MDN1Q9NU22 5596 aa7.34□□□□□ -1.23
NHLH1-201ENST00000302101 LCE1AQ5T7P2 110 aa7.31□□□□□ -1.24
NHLH1-201ENST00000302101 KRTAP6-3Q3LI67 103 aa7.29□□□□□ -1.24
NHLH1-201ENST00000302101 SPRR2EP22531 72 aa7.25□□□□□ -1.25
NHLH1-201ENST00000302101 SPRR2BP35325 72 aa7.25□□□□□ -1.25
NHLH1-201ENST00000302101 SPRR2AP35326 72 aa7.25□□□□□ -1.25
NHLH1-201ENST00000302101 DSTQ03001 7570 aaKnown RBP7.2□□□□□ -1.26
NHLH1-201ENST00000302101 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
NHLH1-201ENST00000302101 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
NHLH1-201ENST00000302101 SPRR2DP22532 72 aa6.98□□□□□ -1.29
NHLH1-201ENST00000302101 NEBP20929 6669 aa6.76□□□□□ -1.33
NHLH1-201ENST00000302101 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
NHLH1-201ENST00000302101 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
NHLH1-201ENST00000302101 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
NHLH1-201ENST00000302101 KRTAP6-1Q3LI64 71 aa6.58□□□□□ -1.36
NHLH1-201ENST00000302101 MT1AP04731 61 aa6.57□□□□□ -1.36
NHLH1-201ENST00000302101 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
NHLH1-201ENST00000302101 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
NHLH1-201ENST00000302101 KRTAP5-4Q6L8H1 288 aa6.29□□□□□ -1.4
NHLH1-201ENST00000302101 KRTAP9-4Q9BYQ2 154 aa6.25□□□□□ -1.41
NHLH1-201ENST00000302101 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
NHLH1-201ENST00000302101 KRTAP2-2Q9BYT5 123 aa6.23□□□□□ -1.41
NHLH1-201ENST00000302101 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
NHLH1-201ENST00000302101 LCE3DQ9BYE3 92 aa6.14□□□□□ -1.43
NHLH1-201ENST00000302101 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
NHLH1-201ENST00000302101 MT4P47944 62 aa6.11□□□□□ -1.43
NHLH1-201ENST00000302101 LCE3EQ5T5B0 92 aa6.06□□□□□ -1.44
NHLH1-201ENST00000302101 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
NHLH1-201ENST00000302101 MT3P25713 68 aa5.96□□□□□ -1.46
NHLH1-201ENST00000302101 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
NHLH1-201ENST00000302101 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
NHLH1-201ENST00000302101 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
NHLH1-201ENST00000302101 PRM1P04553 51 aa5.86□□□□□ -1.47
NHLH1-201ENST00000302101 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
NHLH1-201ENST00000302101 KRTAP5-2Q701N4 177 aa5.72□□□□□ -1.49
NHLH1-201ENST00000302101 LCE1EQ5T753 118 aa5.69□□□□□ -1.5
NHLH1-201ENST00000302101 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
NHLH1-201ENST00000302101 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
NHLH1-201ENST00000302101 KRTAP4-12Q9BQ66 201 aa5.32□□□□□ -1.56
NHLH1-201ENST00000302101 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
NHLH1-201ENST00000302101 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
NHLH1-201ENST00000302101 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
NHLH1-201ENST00000302101 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
NHLH1-201ENST00000302101 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
NHLH1-201ENST00000302101 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
NHLH1-201ENST00000302101 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
NHLH1-201ENST00000302101 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
NHLH1-201ENST00000302101 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
NHLH1-201ENST00000302101 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
NHLH1-201ENST00000302101 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
NHLH1-201ENST00000302101 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
NHLH1-201ENST00000302101 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
NHLH1-201ENST00000302101 KRTAP21-2Q3LI59 83 aa4.29□□□□□ -1.72
NHLH1-201ENST00000302101 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
NHLH1-201ENST00000302101 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
NHLH1-201ENST00000302101 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
NHLH1-201ENST00000302101 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
NHLH1-201ENST00000302101 KRTAP21-1Q3LI58 79 aa3.69□□□□□ -1.82
NHLH1-201ENST00000302101 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
NHLH1-201ENST00000302101 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
NHLH1-201ENST00000302101 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 66.8 ms