RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
LTBP3-201ENST00000301873 MT1EP04732 61 aa6.79□□□□□ -1.32
LTBP3-201ENST00000301873 LCE3DQ9BYE3 92 aa6.75□□□□□ -1.33
LTBP3-201ENST00000301873 LCE3EQ5T5B0 92 aa6.63□□□□□ -1.35
LTBP3-201ENST00000301873 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
LTBP3-201ENST00000301873 MT1MQ8N339 61 aa6.55□□□□□ -1.36
LTBP3-201ENST00000301873 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
LTBP3-201ENST00000301873 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
LTBP3-201ENST00000301873 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
LTBP3-201ENST00000301873 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
LTBP3-201ENST00000301873 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.37
LTBP3-201ENST00000301873 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
LTBP3-201ENST00000301873 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
LTBP3-201ENST00000301873 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
LTBP3-201ENST00000301873 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
LTBP3-201ENST00000301873 MT3P25713 68 aa6.24□□□□□ -1.41
LTBP3-201ENST00000301873 USH2AO75445 5202 aa6.22□□□□□ -1.41
LTBP3-201ENST00000301873 MT4P47944 62 aa6.21□□□□□ -1.42
LTBP3-201ENST00000301873 KRTAP9-6A8MVA2 160 aa6.2□□□□□ -1.42
LTBP3-201ENST00000301873 KRTAP2-3P0C7H8 128 aa6.15□□□□□ -1.42
LTBP3-201ENST00000301873 KRTAP2-4Q9BYR9 128 aa6.15□□□□□ -1.42
LTBP3-201ENST00000301873 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
LTBP3-201ENST00000301873 PRM1P04553 51 aa6.13□□□□□ -1.43
LTBP3-201ENST00000301873 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
LTBP3-201ENST00000301873 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
LTBP3-201ENST00000301873 KMT2DO14686 5537 aa6.02□□□□□ -1.45
LTBP3-201ENST00000301873 MT1AP04731 61 aa6.02□□□□□ -1.45
LTBP3-201ENST00000301873 LCE1BQ5T7P3 118 aa5.96□□□□□ -1.46
LTBP3-201ENST00000301873 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
LTBP3-201ENST00000301873 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
LTBP3-201ENST00000301873 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
LTBP3-201ENST00000301873 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
LTBP3-201ENST00000301873 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
LTBP3-201ENST00000301873 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
LTBP3-201ENST00000301873 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.51
LTBP3-201ENST00000301873 MUC19Q7Z5P9 8384 aa5.6□□□□□ -1.51
LTBP3-201ENST00000301873 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
LTBP3-201ENST00000301873 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
LTBP3-201ENST00000301873 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
LTBP3-201ENST00000301873 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
LTBP3-201ENST00000301873 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
LTBP3-201ENST00000301873 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.47□□□□□ -1.53
LTBP3-201ENST00000301873 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
LTBP3-201ENST00000301873 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
LTBP3-201ENST00000301873 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
LTBP3-201ENST00000301873 NEBP20929 6669 aa4.99□□□□□ -1.61
LTBP3-201ENST00000301873 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
LTBP3-201ENST00000301873 LCE1CQ5T751 118 aa4.89□□□□□ -1.63
LTBP3-201ENST00000301873 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
LTBP3-201ENST00000301873 LCE1FQ5T754 118 aa4.89□□□□□ -1.63
LTBP3-201ENST00000301873 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
LTBP3-201ENST00000301873 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
LTBP3-201ENST00000301873 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
LTBP3-201ENST00000301873 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.66
LTBP3-201ENST00000301873 KRTAP4-11Q9BYQ6 195 aa4.61□□□□□ -1.67
LTBP3-201ENST00000301873 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
LTBP3-201ENST00000301873 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
LTBP3-201ENST00000301873 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.7
LTBP3-201ENST00000301873 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
LTBP3-201ENST00000301873 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
LTBP3-201ENST00000301873 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
LTBP3-201ENST00000301873 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
LTBP3-201ENST00000301873 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
LTBP3-201ENST00000301873 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
LTBP3-201ENST00000301873 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
LTBP3-201ENST00000301873 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
LTBP3-201ENST00000301873 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
LTBP3-201ENST00000301873 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
LTBP3-201ENST00000301873 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
LTBP3-201ENST00000301873 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
LTBP3-201ENST00000301873 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
LTBP3-201ENST00000301873 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
LTBP3-201ENST00000301873 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
LTBP3-201ENST00000301873 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
LTBP3-201ENST00000301873 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
LTBP3-201ENST00000301873 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
LTBP3-201ENST00000301873 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms