RNA–Protein interactions for RNA: ENST00000301072.10

TUBA1C-201, Transcript of tubulin alpha 1c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1C, Length 3,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-201ENST00000301072 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
TUBA1C-201ENST00000301072 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
TUBA1C-201ENST00000301072 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
TUBA1C-201ENST00000301072 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
TUBA1C-201ENST00000301072 KRTAP9-2Q9BYQ4 174 aa5.5□□□□□ -1.53
TUBA1C-201ENST00000301072 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
TUBA1C-201ENST00000301072 MT1GP13640 62 aa5.47□□□□□ -1.53
TUBA1C-201ENST00000301072 MT1MQ8N339 61 aa5.45□□□□□ -1.54
TUBA1C-201ENST00000301072 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
TUBA1C-201ENST00000301072 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
TUBA1C-201ENST00000301072 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
TUBA1C-201ENST00000301072 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
TUBA1C-201ENST00000301072 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
TUBA1C-201ENST00000301072 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
TUBA1C-201ENST00000301072 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
TUBA1C-201ENST00000301072 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
TUBA1C-201ENST00000301072 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.55
TUBA1C-201ENST00000301072 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.55
TUBA1C-201ENST00000301072 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
TUBA1C-201ENST00000301072 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
TUBA1C-201ENST00000301072 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
TUBA1C-201ENST00000301072 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
TUBA1C-201ENST00000301072 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
TUBA1C-201ENST00000301072 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
TUBA1C-201ENST00000301072 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
TUBA1C-201ENST00000301072 SPRR2EP22531 72 aa5.02□□□□□ -1.61
TUBA1C-201ENST00000301072 SPRR2BP35325 72 aa5.02□□□□□ -1.61
TUBA1C-201ENST00000301072 SPRR2AP35326 72 aa5.02□□□□□ -1.61
TUBA1C-201ENST00000301072 PRM1P04553 51 aa4.97□□□□□ -1.61
TUBA1C-201ENST00000301072 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
TUBA1C-201ENST00000301072 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
TUBA1C-201ENST00000301072 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
TUBA1C-201ENST00000301072 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
TUBA1C-201ENST00000301072 MT1AP04731 61 aa4.86□□□□□ -1.63
TUBA1C-201ENST00000301072 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
TUBA1C-201ENST00000301072 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
TUBA1C-201ENST00000301072 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
TUBA1C-201ENST00000301072 SPRR2DP22532 72 aa4.82□□□□□ -1.64
TUBA1C-201ENST00000301072 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
TUBA1C-201ENST00000301072 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
TUBA1C-201ENST00000301072 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
TUBA1C-201ENST00000301072 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
TUBA1C-201ENST00000301072 NEBP20929 6669 aa4.53□□□□□ -1.68
TUBA1C-201ENST00000301072 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
TUBA1C-201ENST00000301072 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
TUBA1C-201ENST00000301072 MUC19Q7Z5P9 8384 aa4.45□□□□□ -1.7
TUBA1C-201ENST00000301072 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
TUBA1C-201ENST00000301072 MT3P25713 68 aa4.37□□□□□ -1.71
TUBA1C-201ENST00000301072 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
TUBA1C-201ENST00000301072 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
TUBA1C-201ENST00000301072 MT4P47944 62 aa4.2□□□□□ -1.74
TUBA1C-201ENST00000301072 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
TUBA1C-201ENST00000301072 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
TUBA1C-201ENST00000301072 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
TUBA1C-201ENST00000301072 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
TUBA1C-201ENST00000301072 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.77
TUBA1C-201ENST00000301072 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
TUBA1C-201ENST00000301072 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
TUBA1C-201ENST00000301072 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
TUBA1C-201ENST00000301072 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
TUBA1C-201ENST00000301072 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
TUBA1C-201ENST00000301072 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
TUBA1C-201ENST00000301072 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
TUBA1C-201ENST00000301072 KRTAP5-8O75690 187 aa3.4□□□□□ -1.86
TUBA1C-201ENST00000301072 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
TUBA1C-201ENST00000301072 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
TUBA1C-201ENST00000301072 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
TUBA1C-201ENST00000301072 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
TUBA1C-201ENST00000301072 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
TUBA1C-201ENST00000301072 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
TUBA1C-201ENST00000301072 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
TUBA1C-201ENST00000301072 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
TUBA1C-201ENST00000301072 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
TUBA1C-201ENST00000301072 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
TUBA1C-201ENST00000301072 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
TUBA1C-201ENST00000301072 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
TUBA1C-201ENST00000301072 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 123.4 ms