RNA–Protein interactions for RNA: ENST00000299135.6

WDR20-201, Transcript of WD repeat domain 20, humanhuman

TSL 1 (best) BASIC

Gene WDR20, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR20-201ENST00000299135 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
WDR20-201ENST00000299135 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
WDR20-201ENST00000299135 MT1XP80297 61 aa3.77□□□□□ -1.81
WDR20-201ENST00000299135 FAT4Q6V0I7 4981 aa3.75□□□□□ -1.81
WDR20-201ENST00000299135 MT1BP07438 61 aa3.75□□□□□ -1.81
WDR20-201ENST00000299135 MT3P25713 68 aa3.69□□□□□ -1.82
WDR20-201ENST00000299135 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
WDR20-201ENST00000299135 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
WDR20-201ENST00000299135 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
WDR20-201ENST00000299135 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
WDR20-201ENST00000299135 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
WDR20-201ENST00000299135 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
WDR20-201ENST00000299135 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
WDR20-201ENST00000299135 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
WDR20-201ENST00000299135 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
WDR20-201ENST00000299135 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
WDR20-201ENST00000299135 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
WDR20-201ENST00000299135 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
WDR20-201ENST00000299135 KMT2DO14686 5537 aa3.28□□□□□ -1.88
WDR20-201ENST00000299135 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
WDR20-201ENST00000299135 MT1LQ93083 61 aa3.28□□□□□ -1.88
WDR20-201ENST00000299135 USH2AO75445 5202 aa3.28□□□□□ -1.88
WDR20-201ENST00000299135 MT1EP04732 61 aa3.25□□□□□ -1.89
WDR20-201ENST00000299135 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
WDR20-201ENST00000299135 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
WDR20-201ENST00000299135 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
WDR20-201ENST00000299135 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
WDR20-201ENST00000299135 MT1GP13640 62 aa3.05□□□□□ -1.92
WDR20-201ENST00000299135 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
WDR20-201ENST00000299135 MT1MQ8N339 61 aa3.02□□□□□ -1.93
WDR20-201ENST00000299135 KRTAP19-6Q3LI70 58 aa3.01□□□□□ -1.93
WDR20-201ENST00000299135 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
WDR20-201ENST00000299135 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
WDR20-201ENST00000299135 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
WDR20-201ENST00000299135 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
WDR20-201ENST00000299135 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
WDR20-201ENST00000299135 MT1AP04731 61 aa2.9□□□□□ -1.94
WDR20-201ENST00000299135 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
WDR20-201ENST00000299135 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.96
WDR20-201ENST00000299135 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
WDR20-201ENST00000299135 PRM1P04553 51 aa2.78□□□□□ -1.96
WDR20-201ENST00000299135 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
WDR20-201ENST00000299135 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
WDR20-201ENST00000299135 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
WDR20-201ENST00000299135 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
WDR20-201ENST00000299135 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
WDR20-201ENST00000299135 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
WDR20-201ENST00000299135 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
WDR20-201ENST00000299135 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
WDR20-201ENST00000299135 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
WDR20-201ENST00000299135 SPRR2EP22531 72 aa2.57□□□□□ -2
WDR20-201ENST00000299135 SPRR2BP35325 72 aa2.57□□□□□ -2
WDR20-201ENST00000299135 SPRR2AP35326 72 aa2.57□□□□□ -2
WDR20-201ENST00000299135 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
WDR20-201ENST00000299135 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
WDR20-201ENST00000299135 SPRR2DP22532 72 aa2.47□□□□□ -2.01
WDR20-201ENST00000299135 NEBP20929 6669 aa2.42□□□□□ -2.02
WDR20-201ENST00000299135 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
WDR20-201ENST00000299135 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
WDR20-201ENST00000299135 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
WDR20-201ENST00000299135 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
WDR20-201ENST00000299135 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
WDR20-201ENST00000299135 MT4P47944 62 aa2.17□□□□□ -2.06
WDR20-201ENST00000299135 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
WDR20-201ENST00000299135 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
WDR20-201ENST00000299135 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
WDR20-201ENST00000299135 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
WDR20-201ENST00000299135 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
WDR20-201ENST00000299135 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
WDR20-201ENST00000299135 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
WDR20-201ENST00000299135 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
WDR20-201ENST00000299135 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
WDR20-201ENST00000299135 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
WDR20-201ENST00000299135 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
WDR20-201ENST00000299135 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
WDR20-201ENST00000299135 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
WDR20-201ENST00000299135 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 114.4 ms