RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
SMCO4-201ENST00000298966 TNP1P09430 55 aa8.45□□□□□ -1.06
SMCO4-201ENST00000298966 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
SMCO4-201ENST00000298966 KRTAP4-8A0A0G2JLE6 195 aa8.42□□□□□ -1.06
SMCO4-201ENST00000298966 KRTAP4-8Q9BYQ9 185 aa8.42□□□□□ -1.06
SMCO4-201ENST00000298966 DSTQ03001 7570 aaKnown RBP8.3□□□□□ -1.08
SMCO4-201ENST00000298966 KRTAP23-1A1A580 65 aa8.26□□□□□ -1.09
SMCO4-201ENST00000298966 PP632Q6XCG6 107 aa8.21□□□□□ -1.1
SMCO4-201ENST00000298966 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
SMCO4-201ENST00000298966 KRTAP10-7P60409 375 aaPredicted RBP8.17□□□□□ -1.1
SMCO4-201ENST00000298966 KRTAP4-9Q9BYQ8 210 aa8.1□□□□□ -1.11
SMCO4-201ENST00000298966 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
SMCO4-201ENST00000298966 HMCN1Q96RW7 5635 aa7.83□□□□□ -1.16
SMCO4-201ENST00000298966 LCE1DQ5T752 114 aa7.83□□□□□ -1.16
SMCO4-201ENST00000298966 LCE5AQ5TCM9 118 aa7.82□□□□□ -1.16
SMCO4-201ENST00000298966 KRTAP4-12Q9BQ66 201 aa7.82□□□□□ -1.16
SMCO4-201ENST00000298966 AHNAK2Q8IVF2 5795 aa7.76□□□□□ -1.17
SMCO4-201ENST00000298966 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
SMCO4-201ENST00000298966 KRTAP19-3Q7Z4W3 81 aa7.73□□□□□ -1.17
SMCO4-201ENST00000298966 KRTAP19-5Q3LI72 72 aa7.69□□□□□ -1.18
SMCO4-201ENST00000298966 MT4P47944 62 aa7.67□□□□□ -1.18
SMCO4-201ENST00000298966 KRTAP19-7Q3SYF9 63 aa7.66□□□□□ -1.18
SMCO4-201ENST00000298966 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
SMCO4-201ENST00000298966 MT1EP04732 61 aa7.64□□□□□ -1.19
SMCO4-201ENST00000298966 KRTAP9-9Q9BYP9 154 aa7.63□□□□□ -1.19
SMCO4-201ENST00000298966 KRTAP9-4Q9BYQ2 154 aa7.63□□□□□ -1.19
SMCO4-201ENST00000298966 KRTAP5-10Q6L8G5 202 aa7.6□□□□□ -1.19
SMCO4-201ENST00000298966 KRTAP15-1Q3LI76 137 aa7.57□□□□□ -1.2
SMCO4-201ENST00000298966 KRTAP19-4Q3LI73 84 aa7.54□□□□□ -1.2
SMCO4-201ENST00000298966 MT1GP13640 62 aa7.48□□□□□ -1.21
SMCO4-201ENST00000298966 KRTAP5-7Q6L8G8 165 aa7.4□□□□□ -1.22
SMCO4-201ENST00000298966 MT1LQ93083 61 aa7.37□□□□□ -1.23
SMCO4-201ENST00000298966 KRTAP5-4Q6L8H1 288 aa7.36□□□□□ -1.23
SMCO4-201ENST00000298966 MT1MQ8N339 61 aa7.33□□□□□ -1.24
SMCO4-201ENST00000298966 KRTAP5-3Q6L8H2 238 aa7.28□□□□□ -1.24
SMCO4-201ENST00000298966 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
SMCO4-201ENST00000298966 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
SMCO4-201ENST00000298966 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
SMCO4-201ENST00000298966 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
SMCO4-201ENST00000298966 KRTAP20-2Q3LI61 65 aa7.01□□□□□ -1.29
SMCO4-201ENST00000298966 KRTAP4-2Q9BYR5 136 aa6.94□□□□□ -1.3
SMCO4-201ENST00000298966 H3BS24 57 aa6.93□□□□□ -1.3
SMCO4-201ENST00000298966 LUZP6Q538Z0 58 aa6.93□□□□□ -1.3
SMCO4-201ENST00000298966 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
SMCO4-201ENST00000298966 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
SMCO4-201ENST00000298966 KRTAP9-6A8MVA2 160 aa6.78□□□□□ -1.32
SMCO4-201ENST00000298966 KRTAP5-5Q701N2 237 aaPredicted RBP6.75□□□□□ -1.33
SMCO4-201ENST00000298966 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
SMCO4-201ENST00000298966 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
SMCO4-201ENST00000298966 AHNAKQ09666 5890 aaKnown RBP6.62□□□□□ -1.35
SMCO4-201ENST00000298966 MUC5ACP98088 5654 aa6.51□□□□□ -1.37
SMCO4-201ENST00000298966 MUC5BQ9HC84 5762 aaPredicted RBP6.47□□□□□ -1.37
SMCO4-201ENST00000298966 KRTAP5-8O75690 187 aa6.36□□□□□ -1.39
SMCO4-201ENST00000298966 KRTAP5-2Q701N4 177 aa6.33□□□□□ -1.4
SMCO4-201ENST00000298966 MT1AP04731 61 aa6.32□□□□□ -1.4
SMCO4-201ENST00000298966 OBSCNQ5VST9 7968 aa6.23□□□□□ -1.41
SMCO4-201ENST00000298966 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
SMCO4-201ENST00000298966 KRTAP6-2Q3LI66 62 aa5.98□□□□□ -1.45
SMCO4-201ENST00000298966 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
SMCO4-201ENST00000298966 KRTAP5-1Q6L8H4 278 aa5.79□□□□□ -1.48
SMCO4-201ENST00000298966 MT3P25713 68 aa5.76□□□□□ -1.49
SMCO4-201ENST00000298966 INE1O15225 51 aa5.62□□□□□ -1.51
SMCO4-201ENST00000298966 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
SMCO4-201ENST00000298966 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
SMCO4-201ENST00000298966 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
SMCO4-201ENST00000298966 LCE1BQ5T7P3 118 aa5.09□□□□□ -1.59
SMCO4-201ENST00000298966 LCE1CQ5T751 118 aa4.93□□□□□ -1.62
SMCO4-201ENST00000298966 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
SMCO4-201ENST00000298966 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
SMCO4-201ENST00000298966 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
SMCO4-201ENST00000298966 PRM1P04553 51 aa4.54□□□□□ -1.68
SMCO4-201ENST00000298966 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
SMCO4-201ENST00000298966 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
SMCO4-201ENST00000298966 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
SMCO4-201ENST00000298966 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
SMCO4-201ENST00000298966 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
SMCO4-201ENST00000298966 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms