RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 MT1EP04732 61 aa5.25□□□□□ -1.57
SNAPC4-201ENST00000298532 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
SNAPC4-201ENST00000298532 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
SNAPC4-201ENST00000298532 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
SNAPC4-201ENST00000298532 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
SNAPC4-201ENST00000298532 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
SNAPC4-201ENST00000298532 MT1MQ8N339 61 aa5.08□□□□□ -1.6
SNAPC4-201ENST00000298532 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
SNAPC4-201ENST00000298532 PRM1P04553 51 aa5.06□□□□□ -1.6
SNAPC4-201ENST00000298532 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
SNAPC4-201ENST00000298532 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
SNAPC4-201ENST00000298532 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
SNAPC4-201ENST00000298532 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
SNAPC4-201ENST00000298532 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
SNAPC4-201ENST00000298532 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
SNAPC4-201ENST00000298532 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
SNAPC4-201ENST00000298532 MT3P25713 68 aa4.94□□□□□ -1.62
SNAPC4-201ENST00000298532 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.93□□□□□ -1.62
SNAPC4-201ENST00000298532 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
SNAPC4-201ENST00000298532 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
SNAPC4-201ENST00000298532 MT4P47944 62 aa4.88□□□□□ -1.63
SNAPC4-201ENST00000298532 MT1AP04731 61 aa4.75□□□□□ -1.65
SNAPC4-201ENST00000298532 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
SNAPC4-201ENST00000298532 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
SNAPC4-201ENST00000298532 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
SNAPC4-201ENST00000298532 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
SNAPC4-201ENST00000298532 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
SNAPC4-201ENST00000298532 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
SNAPC4-201ENST00000298532 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
SNAPC4-201ENST00000298532 MUC2Q02817 5179 aa4.61□□□□□ -1.67
SNAPC4-201ENST00000298532 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
SNAPC4-201ENST00000298532 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
SNAPC4-201ENST00000298532 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
SNAPC4-201ENST00000298532 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
SNAPC4-201ENST00000298532 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
SNAPC4-201ENST00000298532 KRTAP5-9P26371 169 aa4.4□□□□□ -1.71
SNAPC4-201ENST00000298532 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
SNAPC4-201ENST00000298532 USH2AO75445 5202 aa4.36□□□□□ -1.71
SNAPC4-201ENST00000298532 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
SNAPC4-201ENST00000298532 NEBP20929 6669 aa4.19□□□□□ -1.74
SNAPC4-201ENST00000298532 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
SNAPC4-201ENST00000298532 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
SNAPC4-201ENST00000298532 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
SNAPC4-201ENST00000298532 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
SNAPC4-201ENST00000298532 KMT2DO14686 5537 aa3.86□□□□□ -1.79
SNAPC4-201ENST00000298532 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
SNAPC4-201ENST00000298532 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
SNAPC4-201ENST00000298532 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
SNAPC4-201ENST00000298532 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SNAPC4-201ENST00000298532 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
SNAPC4-201ENST00000298532 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
SNAPC4-201ENST00000298532 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
SNAPC4-201ENST00000298532 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
SNAPC4-201ENST00000298532 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
SNAPC4-201ENST00000298532 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
SNAPC4-201ENST00000298532 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
SNAPC4-201ENST00000298532 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
SNAPC4-201ENST00000298532 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
SNAPC4-201ENST00000298532 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
SNAPC4-201ENST00000298532 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
SNAPC4-201ENST00000298532 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
SNAPC4-201ENST00000298532 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
SNAPC4-201ENST00000298532 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
SNAPC4-201ENST00000298532 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
SNAPC4-201ENST00000298532 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
SNAPC4-201ENST00000298532 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
SNAPC4-201ENST00000298532 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
SNAPC4-201ENST00000298532 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
SNAPC4-201ENST00000298532 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
SNAPC4-201ENST00000298532 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
SNAPC4-201ENST00000298532 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
SNAPC4-201ENST00000298532 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
SNAPC4-201ENST00000298532 PHGR1C9JFL3 82 aa2.54□□□□□ -2
SNAPC4-201ENST00000298532 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
SNAPC4-201ENST00000298532 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SNAPC4-201ENST00000298532 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
SNAPC4-201ENST00000298532 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 116.1 ms