RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
UBAP1-201ENST00000297661 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
UBAP1-201ENST00000297661 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
UBAP1-201ENST00000297661 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
UBAP1-201ENST00000297661 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
UBAP1-201ENST00000297661 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
UBAP1-201ENST00000297661 MUC12Q9UKN1 5478 aa5.47□□□□□ -1.53
UBAP1-201ENST00000297661 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
UBAP1-201ENST00000297661 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
UBAP1-201ENST00000297661 MT1LQ93083 61 aa5.32□□□□□ -1.56
UBAP1-201ENST00000297661 MT1EP04732 61 aa5.32□□□□□ -1.56
UBAP1-201ENST00000297661 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
UBAP1-201ENST00000297661 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
UBAP1-201ENST00000297661 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
UBAP1-201ENST00000297661 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
UBAP1-201ENST00000297661 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
UBAP1-201ENST00000297661 SPRR2EP22531 72 aa5.12□□□□□ -1.59
UBAP1-201ENST00000297661 SPRR2BP35325 72 aa5.12□□□□□ -1.59
UBAP1-201ENST00000297661 SPRR2AP35326 72 aa5.12□□□□□ -1.59
UBAP1-201ENST00000297661 NEBP20929 6669 aa5.11□□□□□ -1.59
UBAP1-201ENST00000297661 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
UBAP1-201ENST00000297661 MT1GP13640 62 aa5.07□□□□□ -1.6
UBAP1-201ENST00000297661 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
UBAP1-201ENST00000297661 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
UBAP1-201ENST00000297661 MT1MQ8N339 61 aa4.97□□□□□ -1.61
UBAP1-201ENST00000297661 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
UBAP1-201ENST00000297661 SPRR2DP22532 72 aa4.93□□□□□ -1.62
UBAP1-201ENST00000297661 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
UBAP1-201ENST00000297661 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
UBAP1-201ENST00000297661 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
UBAP1-201ENST00000297661 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
UBAP1-201ENST00000297661 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
UBAP1-201ENST00000297661 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
UBAP1-201ENST00000297661 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
UBAP1-201ENST00000297661 MT1AP04731 61 aa4.49□□□□□ -1.69
UBAP1-201ENST00000297661 PRM1P04553 51 aa4.48□□□□□ -1.69
UBAP1-201ENST00000297661 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
UBAP1-201ENST00000297661 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
UBAP1-201ENST00000297661 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
UBAP1-201ENST00000297661 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
UBAP1-201ENST00000297661 MT4P47944 62 aa4.39□□□□□ -1.71
UBAP1-201ENST00000297661 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
UBAP1-201ENST00000297661 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
UBAP1-201ENST00000297661 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
UBAP1-201ENST00000297661 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
UBAP1-201ENST00000297661 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
UBAP1-201ENST00000297661 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
UBAP1-201ENST00000297661 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
UBAP1-201ENST00000297661 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
UBAP1-201ENST00000297661 MT3P25713 68 aa3.97□□□□□ -1.77
UBAP1-201ENST00000297661 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
UBAP1-201ENST00000297661 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
UBAP1-201ENST00000297661 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
UBAP1-201ENST00000297661 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
UBAP1-201ENST00000297661 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
UBAP1-201ENST00000297661 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
UBAP1-201ENST00000297661 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
UBAP1-201ENST00000297661 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
UBAP1-201ENST00000297661 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
UBAP1-201ENST00000297661 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
UBAP1-201ENST00000297661 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
UBAP1-201ENST00000297661 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
UBAP1-201ENST00000297661 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
UBAP1-201ENST00000297661 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
UBAP1-201ENST00000297661 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
UBAP1-201ENST00000297661 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
UBAP1-201ENST00000297661 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
UBAP1-201ENST00000297661 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
UBAP1-201ENST00000297661 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
UBAP1-201ENST00000297661 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
UBAP1-201ENST00000297661 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
UBAP1-201ENST00000297661 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
UBAP1-201ENST00000297661 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
UBAP1-201ENST00000297661 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
UBAP1-201ENST00000297661 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
UBAP1-201ENST00000297661 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
UBAP1-201ENST00000297661 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms