RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
FNDC1-201ENST00000297267 HERC1Q15751 4861 aa4.68□□□□□ -1.66
FNDC1-201ENST00000297267 EPPK1P58107 5090 aaKnown RBP4.65□□□□□ -1.67
FNDC1-201ENST00000297267 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.67
FNDC1-201ENST00000297267 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
FNDC1-201ENST00000297267 HMCN2Q8NDA2 5059 aa4.63□□□□□ -1.67
FNDC1-201ENST00000297267 BIRC6Q9NR09 4857 aa4.59□□□□□ -1.68
FNDC1-201ENST00000297267 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
FNDC1-201ENST00000297267 MUC2Q02817 5179 aa4.49□□□□□ -1.69
FNDC1-201ENST00000297267 MT3P25713 68 aa4.49□□□□□ -1.69
FNDC1-201ENST00000297267 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
FNDC1-201ENST00000297267 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
FNDC1-201ENST00000297267 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
FNDC1-201ENST00000297267 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
FNDC1-201ENST00000297267 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
FNDC1-201ENST00000297267 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
FNDC1-201ENST00000297267 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
FNDC1-201ENST00000297267 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
FNDC1-201ENST00000297267 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
FNDC1-201ENST00000297267 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
FNDC1-201ENST00000297267 KMT2DO14686 5537 aa4.32□□□□□ -1.72
FNDC1-201ENST00000297267 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
FNDC1-201ENST00000297267 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
FNDC1-201ENST00000297267 MT1AP04731 61 aa4.22□□□□□ -1.73
FNDC1-201ENST00000297267 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
FNDC1-201ENST00000297267 KRTAP9-6A0A140TA67 174 aa4.22□□□□□ -1.73
FNDC1-201ENST00000297267 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
FNDC1-201ENST00000297267 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
FNDC1-201ENST00000297267 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
FNDC1-201ENST00000297267 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
FNDC1-201ENST00000297267 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
FNDC1-201ENST00000297267 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
FNDC1-201ENST00000297267 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
FNDC1-201ENST00000297267 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
FNDC1-201ENST00000297267 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
FNDC1-201ENST00000297267 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
FNDC1-201ENST00000297267 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.81
FNDC1-201ENST00000297267 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
FNDC1-201ENST00000297267 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
FNDC1-201ENST00000297267 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
FNDC1-201ENST00000297267 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
FNDC1-201ENST00000297267 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
FNDC1-201ENST00000297267 USH2AO75445 5202 aa3.69□□□□□ -1.82
FNDC1-201ENST00000297267 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
FNDC1-201ENST00000297267 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
FNDC1-201ENST00000297267 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
FNDC1-201ENST00000297267 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
FNDC1-201ENST00000297267 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
FNDC1-201ENST00000297267 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
FNDC1-201ENST00000297267 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
FNDC1-201ENST00000297267 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
FNDC1-201ENST00000297267 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
FNDC1-201ENST00000297267 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
FNDC1-201ENST00000297267 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
FNDC1-201ENST00000297267 NEBP20929 6669 aa3.2□□□□□ -1.9
FNDC1-201ENST00000297267 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
FNDC1-201ENST00000297267 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
FNDC1-201ENST00000297267 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
FNDC1-201ENST00000297267 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
FNDC1-201ENST00000297267 MUC5ACP98088 5654 aa2.55□□□□□ -2
FNDC1-201ENST00000297267 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
FNDC1-201ENST00000297267 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
FNDC1-201ENST00000297267 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
FNDC1-201ENST00000297267 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
FNDC1-201ENST00000297267 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
FNDC1-201ENST00000297267 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
FNDC1-201ENST00000297267 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
FNDC1-201ENST00000297267 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
FNDC1-201ENST00000297267 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
FNDC1-201ENST00000297267 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
FNDC1-201ENST00000297267 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
FNDC1-201ENST00000297267 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
FNDC1-201ENST00000297267 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
FNDC1-201ENST00000297267 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
FNDC1-201ENST00000297267 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
FNDC1-201ENST00000297267 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
FNDC1-201ENST00000297267 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 67.1 ms