RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 BIRC6Q9NR09 4857 aa3.32□□□□□ -1.88
PBRM1-201ENST00000296302 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
PBRM1-201ENST00000296302 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
PBRM1-201ENST00000296302 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
PBRM1-201ENST00000296302 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
PBRM1-201ENST00000296302 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
PBRM1-201ENST00000296302 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
PBRM1-201ENST00000296302 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
PBRM1-201ENST00000296302 MT1AP04731 61 aa3.21□□□□□ -1.9
PBRM1-201ENST00000296302 HMCN2Q8NDA2 5059 aa3.13□□□□□ -1.91
PBRM1-201ENST00000296302 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
PBRM1-201ENST00000296302 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
PBRM1-201ENST00000296302 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
PBRM1-201ENST00000296302 RNF213Q63HN8 5207 aa3.11□□□□□ -1.91
PBRM1-201ENST00000296302 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
PBRM1-201ENST00000296302 LCE2AQ5TA79 106 aaPredicted RBP3.07□□□□□ -1.92
PBRM1-201ENST00000296302 MT4P47944 62 aa3.06□□□□□ -1.92
PBRM1-201ENST00000296302 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
PBRM1-201ENST00000296302 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
PBRM1-201ENST00000296302 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
PBRM1-201ENST00000296302 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
PBRM1-201ENST00000296302 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
PBRM1-201ENST00000296302 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
PBRM1-201ENST00000296302 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
PBRM1-201ENST00000296302 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
PBRM1-201ENST00000296302 MUC2Q02817 5179 aa2.91□□□□□ -1.94
PBRM1-201ENST00000296302 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
PBRM1-201ENST00000296302 KRTAP9-2Q9BYQ4 174 aa2.88□□□□□ -1.95
PBRM1-201ENST00000296302 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
PBRM1-201ENST00000296302 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
PBRM1-201ENST00000296302 KRTAP9-6A0A140TA67 174 aa2.8□□□□□ -1.96
PBRM1-201ENST00000296302 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
PBRM1-201ENST00000296302 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
PBRM1-201ENST00000296302 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.97
PBRM1-201ENST00000296302 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
PBRM1-201ENST00000296302 USH2AO75445 5202 aa2.69□□□□□ -1.98
PBRM1-201ENST00000296302 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
PBRM1-201ENST00000296302 LCE1CQ5T751 118 aa2.53□□□□□ -2
PBRM1-201ENST00000296302 LCE1EQ5T753 118 aa2.53□□□□□ -2
PBRM1-201ENST00000296302 LCE1FQ5T754 118 aa2.53□□□□□ -2
PBRM1-201ENST00000296302 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.52□□□□□ -2.01
PBRM1-201ENST00000296302 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
PBRM1-201ENST00000296302 KMT2DO14686 5537 aa2.5□□□□□ -2.01
PBRM1-201ENST00000296302 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
PBRM1-201ENST00000296302 KRTAP5-9P26371 169 aa2.4□□□□□ -2.02
PBRM1-201ENST00000296302 SSPOA2VEC9 5147 aa2.4□□□□□ -2.02
PBRM1-201ENST00000296302 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.03
PBRM1-201ENST00000296302 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
PBRM1-201ENST00000296302 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
PBRM1-201ENST00000296302 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
PBRM1-201ENST00000296302 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
PBRM1-201ENST00000296302 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
PBRM1-201ENST00000296302 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
PBRM1-201ENST00000296302 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
PBRM1-201ENST00000296302 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
PBRM1-201ENST00000296302 NEBP20929 6669 aa2.24□□□□□ -2.05
PBRM1-201ENST00000296302 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
PBRM1-201ENST00000296302 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
PBRM1-201ENST00000296302 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
PBRM1-201ENST00000296302 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
PBRM1-201ENST00000296302 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
PBRM1-201ENST00000296302 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
PBRM1-201ENST00000296302 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
PBRM1-201ENST00000296302 KRTAP5-3Q6L8H2 238 aa1.86□□□□□ -2.11
PBRM1-201ENST00000296302 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
PBRM1-201ENST00000296302 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
PBRM1-201ENST00000296302 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
PBRM1-201ENST00000296302 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
PBRM1-201ENST00000296302 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
PBRM1-201ENST00000296302 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
PBRM1-201ENST00000296302 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
PBRM1-201ENST00000296302 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
PBRM1-201ENST00000296302 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
PBRM1-201ENST00000296302 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
PBRM1-201ENST00000296302 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
PBRM1-201ENST00000296302 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
PBRM1-201ENST00000296302 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 430.8 ms