RNA–Protein interactions for RNA: ENST00000295887.5

CDS1-201, Transcript of CDP-diacylglycerol synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-201ENST00000295887 MT1EP04732 61 aa5.5□□□□□ -1.53
CDS1-201ENST00000295887 SPRR2EP22531 72 aa5.46□□□□□ -1.53
CDS1-201ENST00000295887 SPRR2BP35325 72 aa5.46□□□□□ -1.53
CDS1-201ENST00000295887 SPRR2AP35326 72 aa5.46□□□□□ -1.53
CDS1-201ENST00000295887 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
CDS1-201ENST00000295887 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
CDS1-201ENST00000295887 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
CDS1-201ENST00000295887 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
CDS1-201ENST00000295887 KMT2DO14686 5537 aa5.36□□□□□ -1.55
CDS1-201ENST00000295887 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
CDS1-201ENST00000295887 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
CDS1-201ENST00000295887 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
CDS1-201ENST00000295887 MT1MQ8N339 61 aa5.25□□□□□ -1.57
CDS1-201ENST00000295887 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
CDS1-201ENST00000295887 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
CDS1-201ENST00000295887 SPRR2DP22532 72 aa5.24□□□□□ -1.57
CDS1-201ENST00000295887 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
CDS1-201ENST00000295887 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
CDS1-201ENST00000295887 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
CDS1-201ENST00000295887 LCE3EQ5T5B0 92 aa5.13□□□□□ -1.59
CDS1-201ENST00000295887 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
CDS1-201ENST00000295887 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
CDS1-201ENST00000295887 KRTAP2-1Q9BYU5 128 aa5.12□□□□□ -1.59
CDS1-201ENST00000295887 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
CDS1-201ENST00000295887 SSPOA2VEC9 5147 aa5□□□□□ -1.61
CDS1-201ENST00000295887 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
CDS1-201ENST00000295887 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
CDS1-201ENST00000295887 MACF1Q9UPN3 7388 aaKnown RBP4.89□□□□□ -1.63
CDS1-201ENST00000295887 PRM1P04553 51 aa4.86□□□□□ -1.63
CDS1-201ENST00000295887 MT4P47944 62 aa4.79□□□□□ -1.64
CDS1-201ENST00000295887 MT1AP04731 61 aa4.78□□□□□ -1.64
CDS1-201ENST00000295887 MT3P25713 68 aa4.75□□□□□ -1.65
CDS1-201ENST00000295887 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
CDS1-201ENST00000295887 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
CDS1-201ENST00000295887 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
CDS1-201ENST00000295887 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
CDS1-201ENST00000295887 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
CDS1-201ENST00000295887 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
CDS1-201ENST00000295887 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
CDS1-201ENST00000295887 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
CDS1-201ENST00000295887 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.7
CDS1-201ENST00000295887 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.7
CDS1-201ENST00000295887 NEBP20929 6669 aa4.4□□□□□ -1.71
CDS1-201ENST00000295887 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
CDS1-201ENST00000295887 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
CDS1-201ENST00000295887 MUC19Q7Z5P9 8384 aa4.19□□□□□ -1.74
CDS1-201ENST00000295887 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
CDS1-201ENST00000295887 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
CDS1-201ENST00000295887 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
CDS1-201ENST00000295887 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.78
CDS1-201ENST00000295887 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
CDS1-201ENST00000295887 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
CDS1-201ENST00000295887 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
CDS1-201ENST00000295887 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
CDS1-201ENST00000295887 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
CDS1-201ENST00000295887 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
CDS1-201ENST00000295887 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
CDS1-201ENST00000295887 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
CDS1-201ENST00000295887 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
CDS1-201ENST00000295887 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.88
CDS1-201ENST00000295887 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
CDS1-201ENST00000295887 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
CDS1-201ENST00000295887 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
CDS1-201ENST00000295887 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
CDS1-201ENST00000295887 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
CDS1-201ENST00000295887 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
CDS1-201ENST00000295887 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
CDS1-201ENST00000295887 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
CDS1-201ENST00000295887 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
CDS1-201ENST00000295887 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.97
CDS1-201ENST00000295887 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
CDS1-201ENST00000295887 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
CDS1-201ENST00000295887 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CDS1-201ENST00000295887 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
CDS1-201ENST00000295887 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.02
CDS1-201ENST00000295887 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
CDS1-201ENST00000295887 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 378.4 ms