RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 MT1GP13640 62 aa4.77□□□□□ -1.65
CCT3-201ENST00000295688 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
CCT3-201ENST00000295688 MT1MQ8N339 61 aa4.74□□□□□ -1.65
CCT3-201ENST00000295688 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
CCT3-201ENST00000295688 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.65
CCT3-201ENST00000295688 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
CCT3-201ENST00000295688 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
CCT3-201ENST00000295688 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
CCT3-201ENST00000295688 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
CCT3-201ENST00000295688 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
CCT3-201ENST00000295688 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
CCT3-201ENST00000295688 MT1AP04731 61 aa4.41□□□□□ -1.7
CCT3-201ENST00000295688 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
CCT3-201ENST00000295688 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
CCT3-201ENST00000295688 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
CCT3-201ENST00000295688 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
CCT3-201ENST00000295688 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
CCT3-201ENST00000295688 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
CCT3-201ENST00000295688 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
CCT3-201ENST00000295688 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
CCT3-201ENST00000295688 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
CCT3-201ENST00000295688 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.73
CCT3-201ENST00000295688 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
CCT3-201ENST00000295688 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
CCT3-201ENST00000295688 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
CCT3-201ENST00000295688 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
CCT3-201ENST00000295688 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
CCT3-201ENST00000295688 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
CCT3-201ENST00000295688 SPRR2EP22531 72 aa4.04□□□□□ -1.76
CCT3-201ENST00000295688 SPRR2BP35325 72 aa4.04□□□□□ -1.76
CCT3-201ENST00000295688 SPRR2AP35326 72 aa4.04□□□□□ -1.76
CCT3-201ENST00000295688 PRM1P04553 51 aa4.03□□□□□ -1.76
CCT3-201ENST00000295688 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
CCT3-201ENST00000295688 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
CCT3-201ENST00000295688 SYNE2Q8WXH0 6885 aaKnown RBP3.96□□□□□ -1.78
CCT3-201ENST00000295688 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
CCT3-201ENST00000295688 MT3P25713 68 aa3.9□□□□□ -1.79
CCT3-201ENST00000295688 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
CCT3-201ENST00000295688 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
CCT3-201ENST00000295688 SPRR2DP22532 72 aa3.87□□□□□ -1.79
CCT3-201ENST00000295688 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
CCT3-201ENST00000295688 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
CCT3-201ENST00000295688 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
CCT3-201ENST00000295688 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
CCT3-201ENST00000295688 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
CCT3-201ENST00000295688 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
CCT3-201ENST00000295688 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
CCT3-201ENST00000295688 NEBP20929 6669 aa3.48□□□□□ -1.85
CCT3-201ENST00000295688 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
CCT3-201ENST00000295688 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
CCT3-201ENST00000295688 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
CCT3-201ENST00000295688 MT4P47944 62 aa3.36□□□□□ -1.87
CCT3-201ENST00000295688 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
CCT3-201ENST00000295688 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
CCT3-201ENST00000295688 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
CCT3-201ENST00000295688 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
CCT3-201ENST00000295688 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
CCT3-201ENST00000295688 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
CCT3-201ENST00000295688 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
CCT3-201ENST00000295688 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
CCT3-201ENST00000295688 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
CCT3-201ENST00000295688 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CCT3-201ENST00000295688 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.96
CCT3-201ENST00000295688 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
CCT3-201ENST00000295688 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
CCT3-201ENST00000295688 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
CCT3-201ENST00000295688 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CCT3-201ENST00000295688 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
CCT3-201ENST00000295688 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
CCT3-201ENST00000295688 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
CCT3-201ENST00000295688 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CCT3-201ENST00000295688 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
CCT3-201ENST00000295688 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
CCT3-201ENST00000295688 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
CCT3-201ENST00000295688 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CCT3-201ENST00000295688 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
CCT3-201ENST00000295688 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms