RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 LCE5AQ5TCM9 118 aa8.12□□□□□ -1.11
LINC01116-201ENST00000295549 SPRR2DP22532 72 aa8.11□□□□□ -1.11
LINC01116-201ENST00000295549 PP632Q6XCG6 107 aa8.09□□□□□ -1.11
LINC01116-201ENST00000295549 MT1LQ93083 61 aa8.08□□□□□ -1.12
LINC01116-201ENST00000295549 MT1GP13640 62 aa8.05□□□□□ -1.12
LINC01116-201ENST00000295549 KRTAP2-3P0C7H8 128 aa8.04□□□□□ -1.12
LINC01116-201ENST00000295549 KRTAP2-4Q9BYR9 128 aa8.04□□□□□ -1.12
LINC01116-201ENST00000295549 PRO0628Q9UI54 55 aa7.98□□□□□ -1.13
LINC01116-201ENST00000295549 PMAIP1Q13794 54 aa7.96□□□□□ -1.13
LINC01116-201ENST00000295549 MT1MQ8N339 61 aa7.9□□□□□ -1.14
LINC01116-201ENST00000295549 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
LINC01116-201ENST00000295549 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
LINC01116-201ENST00000295549 KRTAP19-4Q3LI73 84 aa7.8□□□□□ -1.16
LINC01116-201ENST00000295549 KRTAP2-2Q9BYT5 123 aa7.78□□□□□ -1.16
LINC01116-201ENST00000295549 KRTAP2-1Q9BYU5 128 aa7.78□□□□□ -1.16
LINC01116-201ENST00000295549 DSTQ03001 7570 aaKnown RBP7.73□□□□□ -1.17
LINC01116-201ENST00000295549 KRTAP4-7Q9BYR0 210 aa7.69□□□□□ -1.18
LINC01116-201ENST00000295549 KRTAP4-3Q9BYR4 195 aa7.67□□□□□ -1.18
LINC01116-201ENST00000295549 LCE3CQ5T5A8 94 aa7.59□□□□□ -1.19
LINC01116-201ENST00000295549 PRAC1Q96KF2 57 aa7.5□□□□□ -1.21
LINC01116-201ENST00000295549 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
LINC01116-201ENST00000295549 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
LINC01116-201ENST00000295549 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
LINC01116-201ENST00000295549 LCE4AQ5TA78 99 aa7.23□□□□□ -1.25
LINC01116-201ENST00000295549 KRTAP5-4Q6L8H1 288 aa7.22□□□□□ -1.25
LINC01116-201ENST00000295549 KRTAP5-5Q701N2 237 aaPredicted RBP7.21□□□□□ -1.25
LINC01116-201ENST00000295549 KRTAP9-6A8MVA2 160 aa7.14□□□□□ -1.27
LINC01116-201ENST00000295549 KRTAP4-9Q9BYQ8 210 aa7.14□□□□□ -1.27
LINC01116-201ENST00000295549 GPR98Q8WXG9 6306 aa7.08□□□□□ -1.28
LINC01116-201ENST00000295549 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
LINC01116-201ENST00000295549 MT4P47944 62 aa7.04□□□□□ -1.28
LINC01116-201ENST00000295549 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
LINC01116-201ENST00000295549 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
LINC01116-201ENST00000295549 MT1AP04731 61 aa6.88□□□□□ -1.31
LINC01116-201ENST00000295549 KRTAP12-4P60329 112 aa6.88□□□□□ -1.31
LINC01116-201ENST00000295549 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
LINC01116-201ENST00000295549 SYNE1Q8NF91 8797 aaKnown RBP6.83□□□□□ -1.32
LINC01116-201ENST00000295549 KRTAP6-1Q3LI64 71 aa6.8□□□□□ -1.32
LINC01116-201ENST00000295549 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
LINC01116-201ENST00000295549 AHNAK2Q8IVF2 5795 aa6.72□□□□□ -1.33
LINC01116-201ENST00000295549 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
LINC01116-201ENST00000295549 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
LINC01116-201ENST00000295549 KRTAP5-10Q6L8G5 202 aa6.51□□□□□ -1.37
LINC01116-201ENST00000295549 KRTAP5-2Q701N4 177 aa6.42□□□□□ -1.38
LINC01116-201ENST00000295549 KRTAP6-2Q3LI66 62 aa6.39□□□□□ -1.39
LINC01116-201ENST00000295549 H3BS24 57 aa6.34□□□□□ -1.39
LINC01116-201ENST00000295549 MT3P25713 68 aa6.28□□□□□ -1.4
LINC01116-201ENST00000295549 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
LINC01116-201ENST00000295549 KRTAP5-7Q6L8G8 165 aa6.26□□□□□ -1.41
LINC01116-201ENST00000295549 KRTAP4-12Q9BQ66 201 aa6.08□□□□□ -1.44
LINC01116-201ENST00000295549 KRTAP4-11Q9BYQ6 195 aa6.04□□□□□ -1.44
LINC01116-201ENST00000295549 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.47
LINC01116-201ENST00000295549 OBSCNQ5VST9 7968 aa5.88□□□□□ -1.47
LINC01116-201ENST00000295549 KRTAP5-8O75690 187 aa5.82□□□□□ -1.48
LINC01116-201ENST00000295549 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
LINC01116-201ENST00000295549 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
LINC01116-201ENST00000295549 KRTAP5-1Q6L8H4 278 aa5.65□□□□□ -1.5
LINC01116-201ENST00000295549 LCE1EQ5T753 118 aa5.65□□□□□ -1.51
LINC01116-201ENST00000295549 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
LINC01116-201ENST00000295549 AHNAKQ09666 5890 aaKnown RBP5.55□□□□□ -1.52
LINC01116-201ENST00000295549 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
LINC01116-201ENST00000295549 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
LINC01116-201ENST00000295549 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
LINC01116-201ENST00000295549 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
LINC01116-201ENST00000295549 LCE1CQ5T751 118 aa5.23□□□□□ -1.57
LINC01116-201ENST00000295549 LCE1BQ5T7P3 118 aa5.23□□□□□ -1.57
LINC01116-201ENST00000295549 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
LINC01116-201ENST00000295549 INE1O15225 51 aa4.69□□□□□ -1.66
LINC01116-201ENST00000295549 KRTAP5-11Q6L8G4 156 aa4.68□□□□□ -1.66
LINC01116-201ENST00000295549 KRTAP21-2Q3LI59 83 aa4.49□□□□□ -1.69
LINC01116-201ENST00000295549 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
LINC01116-201ENST00000295549 PRM1P04553 51 aa4.32□□□□□ -1.72
LINC01116-201ENST00000295549 PHGR1C9JFL3 82 aa4.03□□□□□ -1.76
LINC01116-201ENST00000295549 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
LINC01116-201ENST00000295549 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
LINC01116-201ENST00000295549 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
LINC01116-201ENST00000295549 MUC16Q8WXI7 14507 aa2.59□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 60.3 ms