RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
GABRB1-201ENST00000295454 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
GABRB1-201ENST00000295454 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.42
GABRB1-201ENST00000295454 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
GABRB1-201ENST00000295454 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
GABRB1-201ENST00000295454 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
GABRB1-201ENST00000295454 MT1MQ8N339 61 aa6.1□□□□□ -1.43
GABRB1-201ENST00000295454 MT1GP13640 62 aa6.06□□□□□ -1.44
GABRB1-201ENST00000295454 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
GABRB1-201ENST00000295454 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
GABRB1-201ENST00000295454 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
GABRB1-201ENST00000295454 MDN1Q9NU22 5596 aa5.9□□□□□ -1.47
GABRB1-201ENST00000295454 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
GABRB1-201ENST00000295454 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
GABRB1-201ENST00000295454 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
GABRB1-201ENST00000295454 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
GABRB1-201ENST00000295454 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
GABRB1-201ENST00000295454 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
GABRB1-201ENST00000295454 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
GABRB1-201ENST00000295454 SPRR2EP22531 72 aa5.77□□□□□ -1.49
GABRB1-201ENST00000295454 SPRR2BP35325 72 aa5.77□□□□□ -1.49
GABRB1-201ENST00000295454 SPRR2AP35326 72 aa5.77□□□□□ -1.49
GABRB1-201ENST00000295454 INE1O15225 51 aa5.7□□□□□ -1.5
GABRB1-201ENST00000295454 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
GABRB1-201ENST00000295454 SPRR2DP22532 72 aa5.53□□□□□ -1.52
GABRB1-201ENST00000295454 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
GABRB1-201ENST00000295454 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
GABRB1-201ENST00000295454 MT1AP04731 61 aa5.4□□□□□ -1.54
GABRB1-201ENST00000295454 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
GABRB1-201ENST00000295454 NEBP20929 6669 aa5.37□□□□□ -1.55
GABRB1-201ENST00000295454 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
GABRB1-201ENST00000295454 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
GABRB1-201ENST00000295454 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
GABRB1-201ENST00000295454 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.57
GABRB1-201ENST00000295454 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
GABRB1-201ENST00000295454 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
GABRB1-201ENST00000295454 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
GABRB1-201ENST00000295454 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
GABRB1-201ENST00000295454 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
GABRB1-201ENST00000295454 MT4P47944 62 aa4.87□□□□□ -1.63
GABRB1-201ENST00000295454 MT3P25713 68 aa4.84□□□□□ -1.64
GABRB1-201ENST00000295454 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
GABRB1-201ENST00000295454 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
GABRB1-201ENST00000295454 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
GABRB1-201ENST00000295454 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
GABRB1-201ENST00000295454 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
GABRB1-201ENST00000295454 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
GABRB1-201ENST00000295454 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
GABRB1-201ENST00000295454 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
GABRB1-201ENST00000295454 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
GABRB1-201ENST00000295454 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
GABRB1-201ENST00000295454 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
GABRB1-201ENST00000295454 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.69
GABRB1-201ENST00000295454 PRM1P04553 51 aa4.38□□□□□ -1.71
GABRB1-201ENST00000295454 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
GABRB1-201ENST00000295454 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
GABRB1-201ENST00000295454 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
GABRB1-201ENST00000295454 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
GABRB1-201ENST00000295454 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
GABRB1-201ENST00000295454 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
GABRB1-201ENST00000295454 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
GABRB1-201ENST00000295454 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
GABRB1-201ENST00000295454 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
GABRB1-201ENST00000295454 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
GABRB1-201ENST00000295454 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
GABRB1-201ENST00000295454 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
GABRB1-201ENST00000295454 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
GABRB1-201ENST00000295454 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
GABRB1-201ENST00000295454 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
GABRB1-201ENST00000295454 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
GABRB1-201ENST00000295454 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
GABRB1-201ENST00000295454 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
GABRB1-201ENST00000295454 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
GABRB1-201ENST00000295454 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
GABRB1-201ENST00000295454 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
GABRB1-201ENST00000295454 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
GABRB1-201ENST00000295454 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms