RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 HERC2O95714 4834 aa4.22□□□□□ -1.73
SEC16A-202ENST00000290037 LRP2P98164 4655 aa4.18□□□□□ -1.74
SEC16A-202ENST00000290037 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
SEC16A-202ENST00000290037 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
SEC16A-202ENST00000290037 KRTAP9-2Q9BYQ4 174 aa4.1□□□□□ -1.75
SEC16A-202ENST00000290037 KMT2CQ8NEZ4 4911 aaKnown RBP4.1□□□□□ -1.75
SEC16A-202ENST00000290037 KIAA1109Q2LD37 5005 aa4.06□□□□□ -1.76
SEC16A-202ENST00000290037 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
SEC16A-202ENST00000290037 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
SEC16A-202ENST00000290037 MT4P47944 62 aa3.95□□□□□ -1.78
SEC16A-202ENST00000290037 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
SEC16A-202ENST00000290037 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
SEC16A-202ENST00000290037 HYDINQ4G0P3 5121 aa3.94□□□□□ -1.78
SEC16A-202ENST00000290037 KRTAP9-6A0A140TA67 174 aa3.93□□□□□ -1.78
SEC16A-202ENST00000290037 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
SEC16A-202ENST00000290037 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
SEC16A-202ENST00000290037 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
SEC16A-202ENST00000290037 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
SEC16A-202ENST00000290037 LPAP08519 4548 aa3.82□□□□□ -1.8
SEC16A-202ENST00000290037 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
SEC16A-202ENST00000290037 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
SEC16A-202ENST00000290037 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
SEC16A-202ENST00000290037 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
SEC16A-202ENST00000290037 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
SEC16A-202ENST00000290037 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
SEC16A-202ENST00000290037 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
SEC16A-202ENST00000290037 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
SEC16A-202ENST00000290037 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
SEC16A-202ENST00000290037 ABCA13Q86UQ4 5058 aa3.58□□□□□ -1.84
SEC16A-202ENST00000290037 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
SEC16A-202ENST00000290037 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
SEC16A-202ENST00000290037 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
SEC16A-202ENST00000290037 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
SEC16A-202ENST00000290037 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
SEC16A-202ENST00000290037 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
SEC16A-202ENST00000290037 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
SEC16A-202ENST00000290037 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
SEC16A-202ENST00000290037 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
SEC16A-202ENST00000290037 UBR4Q5T4S7 5183 aa3.28□□□□□ -1.88
SEC16A-202ENST00000290037 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
SEC16A-202ENST00000290037 FSIP2Q5CZC0 6907 aa3.21□□□□□ -1.9
SEC16A-202ENST00000290037 MUC2Q02817 5179 aa3.11□□□□□ -1.91
SEC16A-202ENST00000290037 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
SEC16A-202ENST00000290037 NEBP20929 6669 aa3.05□□□□□ -1.92
SEC16A-202ENST00000290037 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
SEC16A-202ENST00000290037 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
SEC16A-202ENST00000290037 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
SEC16A-202ENST00000290037 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
SEC16A-202ENST00000290037 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
SEC16A-202ENST00000290037 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
SEC16A-202ENST00000290037 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
SEC16A-202ENST00000290037 USH2AO75445 5202 aa2.86□□□□□ -1.95
SEC16A-202ENST00000290037 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
SEC16A-202ENST00000290037 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
SEC16A-202ENST00000290037 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
SEC16A-202ENST00000290037 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
SEC16A-202ENST00000290037 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
SEC16A-202ENST00000290037 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.98
SEC16A-202ENST00000290037 KMT2DO14686 5537 aa2.64□□□□□ -1.99
SEC16A-202ENST00000290037 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SEC16A-202ENST00000290037 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
SEC16A-202ENST00000290037 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
SEC16A-202ENST00000290037 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.01
SEC16A-202ENST00000290037 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
SEC16A-202ENST00000290037 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
SEC16A-202ENST00000290037 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
SEC16A-202ENST00000290037 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
SEC16A-202ENST00000290037 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
SEC16A-202ENST00000290037 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SEC16A-202ENST00000290037 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
SEC16A-202ENST00000290037 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
SEC16A-202ENST00000290037 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
SEC16A-202ENST00000290037 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
SEC16A-202ENST00000290037 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SEC16A-202ENST00000290037 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
SEC16A-202ENST00000290037 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
SEC16A-202ENST00000290037 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms