RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
ERCC3-201ENST00000285398 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
ERCC3-201ENST00000285398 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
ERCC3-201ENST00000285398 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
ERCC3-201ENST00000285398 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
ERCC3-201ENST00000285398 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
ERCC3-201ENST00000285398 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
ERCC3-201ENST00000285398 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.66□□□□□ -1.82
ERCC3-201ENST00000285398 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.82
ERCC3-201ENST00000285398 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
ERCC3-201ENST00000285398 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
ERCC3-201ENST00000285398 MT1EP04732 61 aa3.59□□□□□ -1.83
ERCC3-201ENST00000285398 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
ERCC3-201ENST00000285398 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
ERCC3-201ENST00000285398 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
ERCC3-201ENST00000285398 MT1LQ93083 61 aa3.51□□□□□ -1.85
ERCC3-201ENST00000285398 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
ERCC3-201ENST00000285398 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
ERCC3-201ENST00000285398 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
ERCC3-201ENST00000285398 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
ERCC3-201ENST00000285398 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
ERCC3-201ENST00000285398 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
ERCC3-201ENST00000285398 SPRR2EP22531 72 aa3.44□□□□□ -1.86
ERCC3-201ENST00000285398 SPRR2BP35325 72 aa3.44□□□□□ -1.86
ERCC3-201ENST00000285398 SPRR2AP35326 72 aa3.44□□□□□ -1.86
ERCC3-201ENST00000285398 NEBP20929 6669 aa3.43□□□□□ -1.86
ERCC3-201ENST00000285398 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
ERCC3-201ENST00000285398 MT1MQ8N339 61 aa3.39□□□□□ -1.87
ERCC3-201ENST00000285398 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
ERCC3-201ENST00000285398 MT1GP13640 62 aa3.38□□□□□ -1.87
ERCC3-201ENST00000285398 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
ERCC3-201ENST00000285398 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
ERCC3-201ENST00000285398 SPRR2DP22532 72 aa3.3□□□□□ -1.88
ERCC3-201ENST00000285398 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
ERCC3-201ENST00000285398 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
ERCC3-201ENST00000285398 LCE3BQ5TA77 95 aa3.17□□□□□ -1.9
ERCC3-201ENST00000285398 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
ERCC3-201ENST00000285398 MT1AP04731 61 aa3.1□□□□□ -1.91
ERCC3-201ENST00000285398 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
ERCC3-201ENST00000285398 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
ERCC3-201ENST00000285398 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
ERCC3-201ENST00000285398 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
ERCC3-201ENST00000285398 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
ERCC3-201ENST00000285398 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
ERCC3-201ENST00000285398 PRM1P04553 51 aa3.02□□□□□ -1.93
ERCC3-201ENST00000285398 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
ERCC3-201ENST00000285398 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.93
ERCC3-201ENST00000285398 MT4P47944 62 aa2.95□□□□□ -1.94
ERCC3-201ENST00000285398 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
ERCC3-201ENST00000285398 MT3P25713 68 aa2.92□□□□□ -1.94
ERCC3-201ENST00000285398 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
ERCC3-201ENST00000285398 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
ERCC3-201ENST00000285398 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
ERCC3-201ENST00000285398 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
ERCC3-201ENST00000285398 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
ERCC3-201ENST00000285398 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
ERCC3-201ENST00000285398 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
ERCC3-201ENST00000285398 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
ERCC3-201ENST00000285398 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
ERCC3-201ENST00000285398 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
ERCC3-201ENST00000285398 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
ERCC3-201ENST00000285398 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
ERCC3-201ENST00000285398 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
ERCC3-201ENST00000285398 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
ERCC3-201ENST00000285398 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
ERCC3-201ENST00000285398 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
ERCC3-201ENST00000285398 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
ERCC3-201ENST00000285398 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
ERCC3-201ENST00000285398 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
ERCC3-201ENST00000285398 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
ERCC3-201ENST00000285398 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
ERCC3-201ENST00000285398 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
ERCC3-201ENST00000285398 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
ERCC3-201ENST00000285398 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
ERCC3-201ENST00000285398 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
ERCC3-201ENST00000285398 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
ERCC3-201ENST00000285398 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms