RNA–Protein interactions for RNA: ENST00000282344.10

USP12-201, Transcript of ubiquitin specific peptidase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP12, Length 4,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-201ENST00000282344 OBSCNQ5VST9 7968 aa6.99□□□□□ -1.29
USP12-201ENST00000282344 LCE3DQ9BYE3 92 aa6.93□□□□□ -1.3
USP12-201ENST00000282344 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
USP12-201ENST00000282344 LOC100996750A0A140TA64 210 aa6.91□□□□□ -1.3
USP12-201ENST00000282344 KRTAP4-3Q9BYR4 195 aa6.9□□□□□ -1.31
USP12-201ENST00000282344 MT1MQ8N339 61 aa6.83□□□□□ -1.32
USP12-201ENST00000282344 LCE3EQ5T5B0 92 aa6.83□□□□□ -1.32
USP12-201ENST00000282344 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
USP12-201ENST00000282344 SPRR2DP22532 72 aa6.75□□□□□ -1.33
USP12-201ENST00000282344 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
USP12-201ENST00000282344 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
USP12-201ENST00000282344 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
USP12-201ENST00000282344 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
USP12-201ENST00000282344 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
USP12-201ENST00000282344 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
USP12-201ENST00000282344 KRTAP2-1Q9BYU5 128 aa6.62□□□□□ -1.35
USP12-201ENST00000282344 USH2AO75445 5202 aa6.54□□□□□ -1.36
USP12-201ENST00000282344 KMT2DO14686 5537 aa6.5□□□□□ -1.37
USP12-201ENST00000282344 KRTAP4-9Q9BYQ8 210 aa6.47□□□□□ -1.37
USP12-201ENST00000282344 PRM1P04553 51 aa6.44□□□□□ -1.38
USP12-201ENST00000282344 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
USP12-201ENST00000282344 MT3P25713 68 aa6.32□□□□□ -1.4
USP12-201ENST00000282344 MT1AP04731 61 aa6.26□□□□□ -1.41
USP12-201ENST00000282344 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
USP12-201ENST00000282344 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
USP12-201ENST00000282344 MT4P47944 62 aa6.11□□□□□ -1.43
USP12-201ENST00000282344 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
USP12-201ENST00000282344 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
USP12-201ENST00000282344 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
USP12-201ENST00000282344 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
USP12-201ENST00000282344 LCE1BQ5T7P3 118 aa5.88□□□□□ -1.47
USP12-201ENST00000282344 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
USP12-201ENST00000282344 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.48
USP12-201ENST00000282344 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.48
USP12-201ENST00000282344 SSPOA2VEC9 5147 aa5.82□□□□□ -1.48
USP12-201ENST00000282344 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
USP12-201ENST00000282344 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
USP12-201ENST00000282344 KRTAP9-6A0A140TA67 174 aa5.52□□□□□ -1.53
USP12-201ENST00000282344 KRTAP6-3Q3LI67 103 aa5.5□□□□□ -1.53
USP12-201ENST00000282344 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
USP12-201ENST00000282344 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
USP12-201ENST00000282344 MUC19Q7Z5P9 8384 aa5.34□□□□□ -1.55
USP12-201ENST00000282344 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
USP12-201ENST00000282344 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
USP12-201ENST00000282344 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
USP12-201ENST00000282344 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
USP12-201ENST00000282344 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
USP12-201ENST00000282344 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
USP12-201ENST00000282344 NEBP20929 6669 aa4.91□□□□□ -1.62
USP12-201ENST00000282344 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.64
USP12-201ENST00000282344 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
USP12-201ENST00000282344 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
USP12-201ENST00000282344 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
USP12-201ENST00000282344 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
USP12-201ENST00000282344 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
USP12-201ENST00000282344 KRTAP4-4Q9BYR3 166 aa4.38□□□□□ -1.71
USP12-201ENST00000282344 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
USP12-201ENST00000282344 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
USP12-201ENST00000282344 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
USP12-201ENST00000282344 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
USP12-201ENST00000282344 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
USP12-201ENST00000282344 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
USP12-201ENST00000282344 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
USP12-201ENST00000282344 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
USP12-201ENST00000282344 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
USP12-201ENST00000282344 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
USP12-201ENST00000282344 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
USP12-201ENST00000282344 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
USP12-201ENST00000282344 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.88
USP12-201ENST00000282344 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.88
USP12-201ENST00000282344 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
USP12-201ENST00000282344 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
USP12-201ENST00000282344 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
USP12-201ENST00000282344 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
USP12-201ENST00000282344 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
USP12-201ENST00000282344 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
USP12-201ENST00000282344 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 91.9 ms