RNA–Protein interactions for RNA: ENST00000279242.6

MRPL49-201, Transcript of mitochondrial ribosomal protein L49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL49, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-201ENST00000279242 MT1LQ93083 61 aa5.5□□□□□ -1.53
MRPL49-201ENST00000279242 MT1EP04732 61 aa5.48□□□□□ -1.53
MRPL49-201ENST00000279242 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
MRPL49-201ENST00000279242 KMT2DO14686 5537 aa5.42□□□□□ -1.54
MRPL49-201ENST00000279242 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
MRPL49-201ENST00000279242 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
MRPL49-201ENST00000279242 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
MRPL49-201ENST00000279242 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
MRPL49-201ENST00000279242 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
MRPL49-201ENST00000279242 MT1GP13640 62 aa5.16□□□□□ -1.58
MRPL49-201ENST00000279242 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
MRPL49-201ENST00000279242 MT1MQ8N339 61 aa5.11□□□□□ -1.59
MRPL49-201ENST00000279242 KRTAP6-3Q3LI67 103 aa5.04□□□□□ -1.6
MRPL49-201ENST00000279242 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
MRPL49-201ENST00000279242 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
MRPL49-201ENST00000279242 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
MRPL49-201ENST00000279242 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
MRPL49-201ENST00000279242 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
MRPL49-201ENST00000279242 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
MRPL49-201ENST00000279242 NEBP20929 6669 aa4.87□□□□□ -1.63
MRPL49-201ENST00000279242 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
MRPL49-201ENST00000279242 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
MRPL49-201ENST00000279242 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
MRPL49-201ENST00000279242 MT1AP04731 61 aa4.79□□□□□ -1.64
MRPL49-201ENST00000279242 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
MRPL49-201ENST00000279242 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
MRPL49-201ENST00000279242 SPRR2EP22531 72 aa4.66□□□□□ -1.66
MRPL49-201ENST00000279242 SPRR2BP35325 72 aa4.66□□□□□ -1.66
MRPL49-201ENST00000279242 SPRR2AP35326 72 aa4.66□□□□□ -1.66
MRPL49-201ENST00000279242 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
MRPL49-201ENST00000279242 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
MRPL49-201ENST00000279242 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
MRPL49-201ENST00000279242 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
MRPL49-201ENST00000279242 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
MRPL49-201ENST00000279242 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
MRPL49-201ENST00000279242 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
MRPL49-201ENST00000279242 SPRR2DP22532 72 aa4.49□□□□□ -1.69
MRPL49-201ENST00000279242 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
MRPL49-201ENST00000279242 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.7
MRPL49-201ENST00000279242 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
MRPL49-201ENST00000279242 PRM1P04553 51 aa4.28□□□□□ -1.72
MRPL49-201ENST00000279242 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
MRPL49-201ENST00000279242 MT3P25713 68 aa4.21□□□□□ -1.74
MRPL49-201ENST00000279242 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
MRPL49-201ENST00000279242 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
MRPL49-201ENST00000279242 MT4P47944 62 aa3.97□□□□□ -1.77
MRPL49-201ENST00000279242 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
MRPL49-201ENST00000279242 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
MRPL49-201ENST00000279242 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
MRPL49-201ENST00000279242 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
MRPL49-201ENST00000279242 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
MRPL49-201ENST00000279242 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
MRPL49-201ENST00000279242 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
MRPL49-201ENST00000279242 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
MRPL49-201ENST00000279242 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
MRPL49-201ENST00000279242 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
MRPL49-201ENST00000279242 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
MRPL49-201ENST00000279242 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
MRPL49-201ENST00000279242 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
MRPL49-201ENST00000279242 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
MRPL49-201ENST00000279242 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
MRPL49-201ENST00000279242 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
MRPL49-201ENST00000279242 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
MRPL49-201ENST00000279242 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
MRPL49-201ENST00000279242 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
MRPL49-201ENST00000279242 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
MRPL49-201ENST00000279242 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
MRPL49-201ENST00000279242 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
MRPL49-201ENST00000279242 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
MRPL49-201ENST00000279242 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
MRPL49-201ENST00000279242 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
MRPL49-201ENST00000279242 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
MRPL49-201ENST00000279242 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
MRPL49-201ENST00000279242 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
MRPL49-201ENST00000279242 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
MRPL49-201ENST00000279242 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
MRPL49-201ENST00000279242 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 82 ms