RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 SPRR2FQ96RM1 72 aa7.31□□□□□ -1.24
GFRA3-201ENST00000274721 KRTAP9-6A8MVA2 160 aa7.27□□□□□ -1.25
GFRA3-201ENST00000274721 MT1GP13640 62 aa7.27□□□□□ -1.25
GFRA3-201ENST00000274721 H3BS24 57 aa7.23□□□□□ -1.25
GFRA3-201ENST00000274721 SYNE2Q8WXH0 6885 aaKnown RBP7.22□□□□□ -1.25
GFRA3-201ENST00000274721 MT1MQ8N339 61 aa7.2□□□□□ -1.26
GFRA3-201ENST00000274721 KRTAP5-9P26371 169 aa7.18□□□□□ -1.26
GFRA3-201ENST00000274721 LCE5AQ5TCM9 118 aa7.18□□□□□ -1.26
GFRA3-201ENST00000274721 KRTAP4-3Q9BYR4 195 aa7.11□□□□□ -1.27
GFRA3-201ENST00000274721 KRTAP9-6A0A140TA67 174 aa7.02□□□□□ -1.29
GFRA3-201ENST00000274721 LCE1AQ5T7P2 110 aa6.99□□□□□ -1.29
GFRA3-201ENST00000274721 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
GFRA3-201ENST00000274721 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
GFRA3-201ENST00000274721 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
GFRA3-201ENST00000274721 KRTAP6-3Q3LI67 103 aa6.9□□□□□ -1.3
GFRA3-201ENST00000274721 SPRR2EP22531 72 aa6.84□□□□□ -1.31
GFRA3-201ENST00000274721 SPRR2BP35325 72 aa6.84□□□□□ -1.31
GFRA3-201ENST00000274721 SPRR2AP35326 72 aa6.84□□□□□ -1.31
GFRA3-201ENST00000274721 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
GFRA3-201ENST00000274721 DSTQ03001 7570 aaKnown RBP6.82□□□□□ -1.32
GFRA3-201ENST00000274721 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
GFRA3-201ENST00000274721 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
GFRA3-201ENST00000274721 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
GFRA3-201ENST00000274721 SPRR2DP22532 72 aa6.59□□□□□ -1.36
GFRA3-201ENST00000274721 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
GFRA3-201ENST00000274721 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
GFRA3-201ENST00000274721 MT1AP04731 61 aa6.41□□□□□ -1.38
GFRA3-201ENST00000274721 NEBP20929 6669 aa6.41□□□□□ -1.38
GFRA3-201ENST00000274721 INE1O15225 51 aa6.38□□□□□ -1.39
GFRA3-201ENST00000274721 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
GFRA3-201ENST00000274721 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
GFRA3-201ENST00000274721 SYNE1Q8NF91 8797 aaKnown RBP6.17□□□□□ -1.42
GFRA3-201ENST00000274721 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
GFRA3-201ENST00000274721 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
GFRA3-201ENST00000274721 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.45
GFRA3-201ENST00000274721 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
GFRA3-201ENST00000274721 KRTAP2-2Q9BYT5 123 aa5.86□□□□□ -1.47
GFRA3-201ENST00000274721 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
GFRA3-201ENST00000274721 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
GFRA3-201ENST00000274721 MT3P25713 68 aa5.79□□□□□ -1.48
GFRA3-201ENST00000274721 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
GFRA3-201ENST00000274721 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
GFRA3-201ENST00000274721 KRTAP20-1Q3LI63 56 aa5.74□□□□□ -1.49
GFRA3-201ENST00000274721 MT4P47944 62 aa5.73□□□□□ -1.49
GFRA3-201ENST00000274721 KRTAP20-2Q3LI61 65 aa5.65□□□□□ -1.51
GFRA3-201ENST00000274721 LCE3EQ5T5B0 92 aa5.62□□□□□ -1.51
GFRA3-201ENST00000274721 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
GFRA3-201ENST00000274721 KRTAP5-2Q701N4 177 aa5.55□□□□□ -1.52
GFRA3-201ENST00000274721 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
GFRA3-201ENST00000274721 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
GFRA3-201ENST00000274721 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
GFRA3-201ENST00000274721 PRM1P04553 51 aa5.02□□□□□ -1.61
GFRA3-201ENST00000274721 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
GFRA3-201ENST00000274721 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.64
GFRA3-201ENST00000274721 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
GFRA3-201ENST00000274721 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
GFRA3-201ENST00000274721 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
GFRA3-201ENST00000274721 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
GFRA3-201ENST00000274721 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
GFRA3-201ENST00000274721 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
GFRA3-201ENST00000274721 LCE1CQ5T751 118 aa4.65□□□□□ -1.66
GFRA3-201ENST00000274721 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.66
GFRA3-201ENST00000274721 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
GFRA3-201ENST00000274721 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
GFRA3-201ENST00000274721 KRTAP21-2Q3LI59 83 aa4.19□□□□□ -1.74
GFRA3-201ENST00000274721 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
GFRA3-201ENST00000274721 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.76
GFRA3-201ENST00000274721 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
GFRA3-201ENST00000274721 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
GFRA3-201ENST00000274721 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
GFRA3-201ENST00000274721 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
GFRA3-201ENST00000274721 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
GFRA3-201ENST00000274721 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
GFRA3-201ENST00000274721 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
GFRA3-201ENST00000274721 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
GFRA3-201ENST00000274721 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
GFRA3-201ENST00000274721 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 192.2 ms