RNA–Protein interactions for RNA: ENST00000274456.6

TNFAIP8-201, Transcript of TNF alpha induced protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP8, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-201ENST00000274456 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
TNFAIP8-201ENST00000274456 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
TNFAIP8-201ENST00000274456 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
TNFAIP8-201ENST00000274456 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
TNFAIP8-201ENST00000274456 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
TNFAIP8-201ENST00000274456 KMT2DO14686 5537 aa3.7□□□□□ -1.82
TNFAIP8-201ENST00000274456 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
TNFAIP8-201ENST00000274456 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
TNFAIP8-201ENST00000274456 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.83
TNFAIP8-201ENST00000274456 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
TNFAIP8-201ENST00000274456 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
TNFAIP8-201ENST00000274456 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
TNFAIP8-201ENST00000274456 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
TNFAIP8-201ENST00000274456 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
TNFAIP8-201ENST00000274456 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
TNFAIP8-201ENST00000274456 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
TNFAIP8-201ENST00000274456 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
TNFAIP8-201ENST00000274456 NEBP20929 6669 aa3.47□□□□□ -1.85
TNFAIP8-201ENST00000274456 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
TNFAIP8-201ENST00000274456 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
TNFAIP8-201ENST00000274456 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
TNFAIP8-201ENST00000274456 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
TNFAIP8-201ENST00000274456 SPRR2EP22531 72 aa3.4□□□□□ -1.87
TNFAIP8-201ENST00000274456 SPRR2BP35325 72 aa3.4□□□□□ -1.87
TNFAIP8-201ENST00000274456 SPRR2AP35326 72 aa3.4□□□□□ -1.87
TNFAIP8-201ENST00000274456 MT1EP04732 61 aa3.39□□□□□ -1.87
TNFAIP8-201ENST00000274456 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
TNFAIP8-201ENST00000274456 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
TNFAIP8-201ENST00000274456 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
TNFAIP8-201ENST00000274456 MT1LQ93083 61 aa3.28□□□□□ -1.88
TNFAIP8-201ENST00000274456 SPRR2DP22532 72 aa3.27□□□□□ -1.89
TNFAIP8-201ENST00000274456 MT1GP13640 62 aa3.25□□□□□ -1.89
TNFAIP8-201ENST00000274456 MT3P25713 68 aa3.25□□□□□ -1.89
TNFAIP8-201ENST00000274456 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
TNFAIP8-201ENST00000274456 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
TNFAIP8-201ENST00000274456 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
TNFAIP8-201ENST00000274456 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
TNFAIP8-201ENST00000274456 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
TNFAIP8-201ENST00000274456 MT1MQ8N339 61 aa3.2□□□□□ -1.9
TNFAIP8-201ENST00000274456 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
TNFAIP8-201ENST00000274456 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
TNFAIP8-201ENST00000274456 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
TNFAIP8-201ENST00000274456 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
TNFAIP8-201ENST00000274456 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
TNFAIP8-201ENST00000274456 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
TNFAIP8-201ENST00000274456 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
TNFAIP8-201ENST00000274456 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
TNFAIP8-201ENST00000274456 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
TNFAIP8-201ENST00000274456 MT4P47944 62 aa2.85□□□□□ -1.95
TNFAIP8-201ENST00000274456 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
TNFAIP8-201ENST00000274456 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
TNFAIP8-201ENST00000274456 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
TNFAIP8-201ENST00000274456 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
TNFAIP8-201ENST00000274456 MT1AP04731 61 aa2.79□□□□□ -1.96
TNFAIP8-201ENST00000274456 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
TNFAIP8-201ENST00000274456 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
TNFAIP8-201ENST00000274456 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
TNFAIP8-201ENST00000274456 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
TNFAIP8-201ENST00000274456 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
TNFAIP8-201ENST00000274456 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
TNFAIP8-201ENST00000274456 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
TNFAIP8-201ENST00000274456 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
TNFAIP8-201ENST00000274456 INE1O15225 51 aa2.45□□□□□ -2.02
TNFAIP8-201ENST00000274456 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
TNFAIP8-201ENST00000274456 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
TNFAIP8-201ENST00000274456 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
TNFAIP8-201ENST00000274456 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
TNFAIP8-201ENST00000274456 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
TNFAIP8-201ENST00000274456 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
TNFAIP8-201ENST00000274456 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
TNFAIP8-201ENST00000274456 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
TNFAIP8-201ENST00000274456 PRM1P04553 51 aa2.01□□□□□ -2.09
TNFAIP8-201ENST00000274456 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
TNFAIP8-201ENST00000274456 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TNFAIP8-201ENST00000274456 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
TNFAIP8-201ENST00000274456 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
TNFAIP8-201ENST00000274456 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms