RNA–Protein interactions for RNA: ENST00000273590.3

TCTA-201, Transcript of T cell leukemia translocation altered, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCTA, Length 2,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTA-201ENST00000273590 MACF1Q9UPN3 7388 aaKnown RBP6.54□□□□□ -1.36
TCTA-201ENST00000273590 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
TCTA-201ENST00000273590 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
TCTA-201ENST00000273590 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
TCTA-201ENST00000273590 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.38
TCTA-201ENST00000273590 MT1MQ8N339 61 aa6.36□□□□□ -1.39
TCTA-201ENST00000273590 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
TCTA-201ENST00000273590 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
TCTA-201ENST00000273590 MT1GP13640 62 aa6.34□□□□□ -1.39
TCTA-201ENST00000273590 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
TCTA-201ENST00000273590 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
TCTA-201ENST00000273590 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
TCTA-201ENST00000273590 KRTAP5-9P26371 169 aa6.23□□□□□ -1.41
TCTA-201ENST00000273590 KRTAP2-3P0C7H8 128 aa6.22□□□□□ -1.41
TCTA-201ENST00000273590 KRTAP2-4Q9BYR9 128 aa6.22□□□□□ -1.41
TCTA-201ENST00000273590 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
TCTA-201ENST00000273590 KRTAP6-3Q3LI67 103 aa6.11□□□□□ -1.43
TCTA-201ENST00000273590 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
TCTA-201ENST00000273590 INE1O15225 51 aa6.04□□□□□ -1.44
TCTA-201ENST00000273590 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
TCTA-201ENST00000273590 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
TCTA-201ENST00000273590 SPRR2EP22531 72 aa5.97□□□□□ -1.45
TCTA-201ENST00000273590 SPRR2BP35325 72 aa5.97□□□□□ -1.45
TCTA-201ENST00000273590 SPRR2AP35326 72 aa5.97□□□□□ -1.45
TCTA-201ENST00000273590 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
TCTA-201ENST00000273590 SPRR2DP22532 72 aa5.75□□□□□ -1.49
TCTA-201ENST00000273590 NEBP20929 6669 aa5.75□□□□□ -1.49
TCTA-201ENST00000273590 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
TCTA-201ENST00000273590 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
TCTA-201ENST00000273590 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
TCTA-201ENST00000273590 MT1AP04731 61 aa5.65□□□□□ -1.5
TCTA-201ENST00000273590 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
TCTA-201ENST00000273590 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
TCTA-201ENST00000273590 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
TCTA-201ENST00000273590 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
TCTA-201ENST00000273590 KRTAP20-1Q3LI63 56 aa5.23□□□□□ -1.57
TCTA-201ENST00000273590 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
TCTA-201ENST00000273590 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.57
TCTA-201ENST00000273590 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
TCTA-201ENST00000273590 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
TCTA-201ENST00000273590 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
TCTA-201ENST00000273590 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
TCTA-201ENST00000273590 MT3P25713 68 aa5.08□□□□□ -1.6
TCTA-201ENST00000273590 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
TCTA-201ENST00000273590 MT4P47944 62 aa4.99□□□□□ -1.61
TCTA-201ENST00000273590 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
TCTA-201ENST00000273590 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
TCTA-201ENST00000273590 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
TCTA-201ENST00000273590 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
TCTA-201ENST00000273590 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
TCTA-201ENST00000273590 PRM1P04553 51 aa4.73□□□□□ -1.65
TCTA-201ENST00000273590 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
TCTA-201ENST00000273590 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
TCTA-201ENST00000273590 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
TCTA-201ENST00000273590 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
TCTA-201ENST00000273590 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
TCTA-201ENST00000273590 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
TCTA-201ENST00000273590 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
TCTA-201ENST00000273590 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
TCTA-201ENST00000273590 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
TCTA-201ENST00000273590 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
TCTA-201ENST00000273590 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
TCTA-201ENST00000273590 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
TCTA-201ENST00000273590 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
TCTA-201ENST00000273590 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
TCTA-201ENST00000273590 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
TCTA-201ENST00000273590 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
TCTA-201ENST00000273590 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
TCTA-201ENST00000273590 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
TCTA-201ENST00000273590 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
TCTA-201ENST00000273590 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
TCTA-201ENST00000273590 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
TCTA-201ENST00000273590 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
TCTA-201ENST00000273590 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
TCTA-201ENST00000273590 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
TCTA-201ENST00000273590 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
TCTA-201ENST00000273590 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 108.4 ms