RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
SEC22C-202ENST00000273156 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
SEC22C-202ENST00000273156 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
SEC22C-202ENST00000273156 LCE1AQ5T7P2 110 aa6.92□□□□□ -1.3
SEC22C-202ENST00000273156 LCE3AQ5TA76 89 aa6.9□□□□□ -1.3
SEC22C-202ENST00000273156 SPRR2DP22532 72 aa6.8□□□□□ -1.32
SEC22C-202ENST00000273156 KRTAP2-2Q9BYT5 123 aa6.77□□□□□ -1.33
SEC22C-202ENST00000273156 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
SEC22C-202ENST00000273156 KRTAP12-3P60328 96 aa6.65□□□□□ -1.34
SEC22C-202ENST00000273156 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
SEC22C-202ENST00000273156 KRTAP4-12Q9BQ66 201 aa6.62□□□□□ -1.35
SEC22C-202ENST00000273156 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
SEC22C-202ENST00000273156 KRTAP9-9Q9BYP9 154 aa6.54□□□□□ -1.36
SEC22C-202ENST00000273156 KRTAP9-4Q9BYQ2 154 aa6.54□□□□□ -1.36
SEC22C-202ENST00000273156 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
SEC22C-202ENST00000273156 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
SEC22C-202ENST00000273156 MT1EP04732 61 aa6.45□□□□□ -1.38
SEC22C-202ENST00000273156 LCE5AQ5TCM9 118 aa6.44□□□□□ -1.38
SEC22C-202ENST00000273156 KRTAP19-3Q7Z4W3 81 aa6.43□□□□□ -1.38
SEC22C-202ENST00000273156 MT1GP13640 62 aa6.3□□□□□ -1.4
SEC22C-202ENST00000273156 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
SEC22C-202ENST00000273156 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
SEC22C-202ENST00000273156 MT1LQ93083 61 aa6.28□□□□□ -1.4
SEC22C-202ENST00000273156 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
SEC22C-202ENST00000273156 LCE1DQ5T752 114 aa6.22□□□□□ -1.41
SEC22C-202ENST00000273156 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.41
SEC22C-202ENST00000273156 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
SEC22C-202ENST00000273156 MT1MQ8N339 61 aa6.14□□□□□ -1.43
SEC22C-202ENST00000273156 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
SEC22C-202ENST00000273156 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
SEC22C-202ENST00000273156 GPR98Q8WXG9 6306 aa6.04□□□□□ -1.44
SEC22C-202ENST00000273156 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
SEC22C-202ENST00000273156 KRTAP4-2Q9BYR5 136 aa6.02□□□□□ -1.45
SEC22C-202ENST00000273156 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.45
SEC22C-202ENST00000273156 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
SEC22C-202ENST00000273156 MT4P47944 62 aa5.92□□□□□ -1.46
SEC22C-202ENST00000273156 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.47
SEC22C-202ENST00000273156 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
SEC22C-202ENST00000273156 H3BS24 57 aa5.84□□□□□ -1.47
SEC22C-202ENST00000273156 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
SEC22C-202ENST00000273156 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
SEC22C-202ENST00000273156 AHNAK2Q8IVF2 5795 aa5.65□□□□□ -1.51
SEC22C-202ENST00000273156 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
SEC22C-202ENST00000273156 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.52
SEC22C-202ENST00000273156 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
SEC22C-202ENST00000273156 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
SEC22C-202ENST00000273156 KRTAP5-3Q6L8H2 238 aa5.54□□□□□ -1.52
SEC22C-202ENST00000273156 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.55
SEC22C-202ENST00000273156 MT1AP04731 61 aa5.35□□□□□ -1.55
SEC22C-202ENST00000273156 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
SEC22C-202ENST00000273156 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
SEC22C-202ENST00000273156 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
SEC22C-202ENST00000273156 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
SEC22C-202ENST00000273156 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
SEC22C-202ENST00000273156 INE1O15225 51 aa4.9□□□□□ -1.63
SEC22C-202ENST00000273156 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
SEC22C-202ENST00000273156 MT3P25713 68 aa4.88□□□□□ -1.63
SEC22C-202ENST00000273156 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
SEC22C-202ENST00000273156 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
SEC22C-202ENST00000273156 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
SEC22C-202ENST00000273156 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
SEC22C-202ENST00000273156 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
SEC22C-202ENST00000273156 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
SEC22C-202ENST00000273156 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
SEC22C-202ENST00000273156 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
SEC22C-202ENST00000273156 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
SEC22C-202ENST00000273156 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
SEC22C-202ENST00000273156 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
SEC22C-202ENST00000273156 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
SEC22C-202ENST00000273156 PRM1P04553 51 aa3.92□□□□□ -1.78
SEC22C-202ENST00000273156 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
SEC22C-202ENST00000273156 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
SEC22C-202ENST00000273156 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
SEC22C-202ENST00000273156 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
SEC22C-202ENST00000273156 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
SEC22C-202ENST00000273156 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
SEC22C-202ENST00000273156 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 99.7 ms