RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
RETREG2-201ENST00000273048 LOC100996750A0A140TA64 210 aa7.82□□□□□ -1.16
RETREG2-201ENST00000273048 KRTAP4-3Q9BYR4 195 aa7.79□□□□□ -1.16
RETREG2-201ENST00000273048 LCE2DQ5TA82 110 aaPredicted RBP7.76□□□□□ -1.17
RETREG2-201ENST00000273048 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
RETREG2-201ENST00000273048 MT1GP13640 62 aa7.69□□□□□ -1.18
RETREG2-201ENST00000273048 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
RETREG2-201ENST00000273048 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
RETREG2-201ENST00000273048 MT1MQ8N339 61 aa7.52□□□□□ -1.21
RETREG2-201ENST00000273048 KRTAP19-3Q7Z4W3 81 aa7.46□□□□□ -1.21
RETREG2-201ENST00000273048 KRTAP12-4P60329 112 aa7.42□□□□□ -1.22
RETREG2-201ENST00000273048 KRTAP9-2Q9BYQ4 174 aa7.42□□□□□ -1.22
RETREG2-201ENST00000273048 DSTQ03001 7570 aaKnown RBP7.41□□□□□ -1.22
RETREG2-201ENST00000273048 MACF1Q9UPN3 7388 aaKnown RBP7.33□□□□□ -1.24
RETREG2-201ENST00000273048 SPRR2FQ96RM1 72 aa7.27□□□□□ -1.25
RETREG2-201ENST00000273048 LCE3BQ5TA77 95 aa7.19□□□□□ -1.26
RETREG2-201ENST00000273048 LCE5AQ5TCM9 118 aa7.18□□□□□ -1.26
RETREG2-201ENST00000273048 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.26
RETREG2-201ENST00000273048 SYNE2Q8WXH0 6885 aaKnown RBP7.15□□□□□ -1.27
RETREG2-201ENST00000273048 SYNE1Q8NF91 8797 aaKnown RBP7.04□□□□□ -1.28
RETREG2-201ENST00000273048 MDN1Q9NU22 5596 aa7.02□□□□□ -1.29
RETREG2-201ENST00000273048 KRTAP6-1Q3LI64 71 aa6.94□□□□□ -1.3
RETREG2-201ENST00000273048 MT1AP04731 61 aa6.88□□□□□ -1.31
RETREG2-201ENST00000273048 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
RETREG2-201ENST00000273048 LCE3DQ9BYE3 92 aa6.79□□□□□ -1.32
RETREG2-201ENST00000273048 LCE1AQ5T7P2 110 aa6.78□□□□□ -1.32
RETREG2-201ENST00000273048 SPRR2EP22531 72 aa6.72□□□□□ -1.33
RETREG2-201ENST00000273048 SPRR2BP35325 72 aa6.72□□□□□ -1.33
RETREG2-201ENST00000273048 SPRR2AP35326 72 aa6.72□□□□□ -1.33
RETREG2-201ENST00000273048 KRTAP9-7A8MTY7 169 aa6.72□□□□□ -1.33
RETREG2-201ENST00000273048 LCE3EQ5T5B0 92 aa6.72□□□□□ -1.33
RETREG2-201ENST00000273048 KRTAP5-5Q701N2 237 aaPredicted RBP6.69□□□□□ -1.34
RETREG2-201ENST00000273048 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
RETREG2-201ENST00000273048 PRM1P04553 51 aa6.62□□□□□ -1.35
RETREG2-201ENST00000273048 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
RETREG2-201ENST00000273048 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
RETREG2-201ENST00000273048 SPRR2DP22532 72 aa6.44□□□□□ -1.38
RETREG2-201ENST00000273048 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
RETREG2-201ENST00000273048 KRTAP6-2Q3LI66 62 aa6.34□□□□□ -1.39
RETREG2-201ENST00000273048 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.39
RETREG2-201ENST00000273048 NEBP20929 6669 aa6.09□□□□□ -1.44
RETREG2-201ENST00000273048 MT3P25713 68 aa6.05□□□□□ -1.44
RETREG2-201ENST00000273048 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
RETREG2-201ENST00000273048 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
RETREG2-201ENST00000273048 MT4P47944 62 aa5.72□□□□□ -1.49
RETREG2-201ENST00000273048 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
RETREG2-201ENST00000273048 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
RETREG2-201ENST00000273048 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
RETREG2-201ENST00000273048 KRTAP20-1Q3LI63 56 aa5.44□□□□□ -1.54
RETREG2-201ENST00000273048 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
RETREG2-201ENST00000273048 HMCN1Q96RW7 5635 aa5.43□□□□□ -1.54
RETREG2-201ENST00000273048 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
RETREG2-201ENST00000273048 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
RETREG2-201ENST00000273048 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
RETREG2-201ENST00000273048 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
RETREG2-201ENST00000273048 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
RETREG2-201ENST00000273048 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
RETREG2-201ENST00000273048 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
RETREG2-201ENST00000273048 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
RETREG2-201ENST00000273048 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
RETREG2-201ENST00000273048 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
RETREG2-201ENST00000273048 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
RETREG2-201ENST00000273048 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
RETREG2-201ENST00000273048 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
RETREG2-201ENST00000273048 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
RETREG2-201ENST00000273048 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
RETREG2-201ENST00000273048 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
RETREG2-201ENST00000273048 KRTAP21-1Q3LI58 79 aa4.14□□□□□ -1.75
RETREG2-201ENST00000273048 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
RETREG2-201ENST00000273048 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
RETREG2-201ENST00000273048 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
RETREG2-201ENST00000273048 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
RETREG2-201ENST00000273048 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
RETREG2-201ENST00000273048 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
RETREG2-201ENST00000273048 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
RETREG2-201ENST00000273048 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
RETREG2-201ENST00000273048 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
RETREG2-201ENST00000273048 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 156.7 ms