RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
UBE2F-201ENST00000272930 MT1GP13640 62 aa6.78□□□□□ -1.32
UBE2F-201ENST00000272930 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
UBE2F-201ENST00000272930 MT1MQ8N339 61 aa6.74□□□□□ -1.33
UBE2F-201ENST00000272930 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
UBE2F-201ENST00000272930 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
UBE2F-201ENST00000272930 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
UBE2F-201ENST00000272930 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.35
UBE2F-201ENST00000272930 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
UBE2F-201ENST00000272930 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
UBE2F-201ENST00000272930 KRTAP2-1Q9BYU5 128 aa6.62□□□□□ -1.35
UBE2F-201ENST00000272930 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
UBE2F-201ENST00000272930 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
UBE2F-201ENST00000272930 KRTAP5-9P26371 169 aa6.5□□□□□ -1.37
UBE2F-201ENST00000272930 INE1O15225 51 aa6.49□□□□□ -1.37
UBE2F-201ENST00000272930 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
UBE2F-201ENST00000272930 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
UBE2F-201ENST00000272930 DSTQ03001 7570 aaKnown RBP6.36□□□□□ -1.39
UBE2F-201ENST00000272930 SPRR2EP22531 72 aa6.24□□□□□ -1.41
UBE2F-201ENST00000272930 SPRR2BP35325 72 aa6.24□□□□□ -1.41
UBE2F-201ENST00000272930 SPRR2AP35326 72 aa6.24□□□□□ -1.41
UBE2F-201ENST00000272930 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
UBE2F-201ENST00000272930 KRTAP6-3Q3LI67 103 aa6.15□□□□□ -1.43
UBE2F-201ENST00000272930 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
UBE2F-201ENST00000272930 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
UBE2F-201ENST00000272930 MT1AP04731 61 aa6.03□□□□□ -1.44
UBE2F-201ENST00000272930 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
UBE2F-201ENST00000272930 SPRR2DP22532 72 aa5.99□□□□□ -1.45
UBE2F-201ENST00000272930 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
UBE2F-201ENST00000272930 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
UBE2F-201ENST00000272930 NEBP20929 6669 aa5.74□□□□□ -1.49
UBE2F-201ENST00000272930 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
UBE2F-201ENST00000272930 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
UBE2F-201ENST00000272930 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
UBE2F-201ENST00000272930 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.51
UBE2F-201ENST00000272930 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
UBE2F-201ENST00000272930 LCE3DQ9BYE3 92 aa5.54□□□□□ -1.52
UBE2F-201ENST00000272930 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
UBE2F-201ENST00000272930 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
UBE2F-201ENST00000272930 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
UBE2F-201ENST00000272930 MT3P25713 68 aa5.42□□□□□ -1.54
UBE2F-201ENST00000272930 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
UBE2F-201ENST00000272930 MT4P47944 62 aa5.21□□□□□ -1.57
UBE2F-201ENST00000272930 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
UBE2F-201ENST00000272930 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
UBE2F-201ENST00000272930 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
UBE2F-201ENST00000272930 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
UBE2F-201ENST00000272930 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
UBE2F-201ENST00000272930 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
UBE2F-201ENST00000272930 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
UBE2F-201ENST00000272930 PRM1P04553 51 aa4.97□□□□□ -1.61
UBE2F-201ENST00000272930 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
UBE2F-201ENST00000272930 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
UBE2F-201ENST00000272930 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
UBE2F-201ENST00000272930 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
UBE2F-201ENST00000272930 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
UBE2F-201ENST00000272930 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
UBE2F-201ENST00000272930 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
UBE2F-201ENST00000272930 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
UBE2F-201ENST00000272930 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
UBE2F-201ENST00000272930 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
UBE2F-201ENST00000272930 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
UBE2F-201ENST00000272930 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
UBE2F-201ENST00000272930 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
UBE2F-201ENST00000272930 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
UBE2F-201ENST00000272930 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
UBE2F-201ENST00000272930 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
UBE2F-201ENST00000272930 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
UBE2F-201ENST00000272930 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
UBE2F-201ENST00000272930 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
UBE2F-201ENST00000272930 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
UBE2F-201ENST00000272930 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
UBE2F-201ENST00000272930 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
UBE2F-201ENST00000272930 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
UBE2F-201ENST00000272930 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
UBE2F-201ENST00000272930 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
UBE2F-201ENST00000272930 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 105.8 ms