RNA–Protein interactions for RNA: ENST00000272430.9

RTKN-202, Transcript of rhotekin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTKN, Length 2,142 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-202ENST00000272430 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
RTKN-202ENST00000272430 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
RTKN-202ENST00000272430 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
RTKN-202ENST00000272430 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
RTKN-202ENST00000272430 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.57
RTKN-202ENST00000272430 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
RTKN-202ENST00000272430 MUC12Q9UKN1 5478 aa5.2□□□□□ -1.58
RTKN-202ENST00000272430 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
RTKN-202ENST00000272430 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
RTKN-202ENST00000272430 MT1MQ8N339 61 aa5.07□□□□□ -1.6
RTKN-202ENST00000272430 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
RTKN-202ENST00000272430 MT1GP13640 62 aa5.05□□□□□ -1.6
RTKN-202ENST00000272430 SPRR2FQ96RM1 72 aa5.04□□□□□ -1.6
RTKN-202ENST00000272430 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
RTKN-202ENST00000272430 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
RTKN-202ENST00000272430 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
RTKN-202ENST00000272430 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
RTKN-202ENST00000272430 MDN1Q9NU22 5596 aa4.9□□□□□ -1.63
RTKN-202ENST00000272430 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
RTKN-202ENST00000272430 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
RTKN-202ENST00000272430 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
RTKN-202ENST00000272430 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
RTKN-202ENST00000272430 SPRR2EP22531 72 aa4.73□□□□□ -1.65
RTKN-202ENST00000272430 SPRR2BP35325 72 aa4.73□□□□□ -1.65
RTKN-202ENST00000272430 SPRR2AP35326 72 aa4.73□□□□□ -1.65
RTKN-202ENST00000272430 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
RTKN-202ENST00000272430 NEBP20929 6669 aa4.55□□□□□ -1.68
RTKN-202ENST00000272430 SPRR2DP22532 72 aa4.55□□□□□ -1.68
RTKN-202ENST00000272430 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
RTKN-202ENST00000272430 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
RTKN-202ENST00000272430 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
RTKN-202ENST00000272430 MT1AP04731 61 aa4.51□□□□□ -1.69
RTKN-202ENST00000272430 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
RTKN-202ENST00000272430 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
RTKN-202ENST00000272430 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
RTKN-202ENST00000272430 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
RTKN-202ENST00000272430 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
RTKN-202ENST00000272430 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
RTKN-202ENST00000272430 PRM1P04553 51 aa4.22□□□□□ -1.73
RTKN-202ENST00000272430 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
RTKN-202ENST00000272430 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
RTKN-202ENST00000272430 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
RTKN-202ENST00000272430 MT3P25713 68 aa4.03□□□□□ -1.76
RTKN-202ENST00000272430 MT4P47944 62 aa3.99□□□□□ -1.77
RTKN-202ENST00000272430 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
RTKN-202ENST00000272430 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
RTKN-202ENST00000272430 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
RTKN-202ENST00000272430 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
RTKN-202ENST00000272430 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
RTKN-202ENST00000272430 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
RTKN-202ENST00000272430 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
RTKN-202ENST00000272430 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
RTKN-202ENST00000272430 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
RTKN-202ENST00000272430 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
RTKN-202ENST00000272430 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
RTKN-202ENST00000272430 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
RTKN-202ENST00000272430 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
RTKN-202ENST00000272430 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
RTKN-202ENST00000272430 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
RTKN-202ENST00000272430 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.89
RTKN-202ENST00000272430 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
RTKN-202ENST00000272430 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
RTKN-202ENST00000272430 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
RTKN-202ENST00000272430 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
RTKN-202ENST00000272430 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
RTKN-202ENST00000272430 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.93
RTKN-202ENST00000272430 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
RTKN-202ENST00000272430 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.96
RTKN-202ENST00000272430 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
RTKN-202ENST00000272430 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
RTKN-202ENST00000272430 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
RTKN-202ENST00000272430 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
RTKN-202ENST00000272430 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
RTKN-202ENST00000272430 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.98
RTKN-202ENST00000272430 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
RTKN-202ENST00000272430 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
RTKN-202ENST00000272430 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms