RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 SERP2Q8N6R1 65 aa5.45□□□□□ -1.54
SOD1-201ENST00000270142 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
SOD1-201ENST00000270142 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
SOD1-201ENST00000270142 MT1LQ93083 61 aa5.42□□□□□ -1.54
SOD1-201ENST00000270142 A0A1B0GU33 70 aa5.4□□□□□ -1.54
SOD1-201ENST00000270142 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
SOD1-201ENST00000270142 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
SOD1-201ENST00000270142 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
SOD1-201ENST00000270142 LCE3AQ5TA76 89 aa5.31□□□□□ -1.56
SOD1-201ENST00000270142 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
SOD1-201ENST00000270142 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
SOD1-201ENST00000270142 A8MU10 97 aa5.26□□□□□ -1.57
SOD1-201ENST00000270142 KRTAP5-10Q6L8G5 202 aa5.26□□□□□ -1.57
SOD1-201ENST00000270142 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
SOD1-201ENST00000270142 TNP1P09430 55 aa5.22□□□□□ -1.57
SOD1-201ENST00000270142 COX7CP15954 63 aa5.22□□□□□ -1.57
SOD1-201ENST00000270142 A0A1B0GU69 56 aa5.21□□□□□ -1.58
SOD1-201ENST00000270142 H7BZZ5 65 aa5.21□□□□□ -1.58
SOD1-201ENST00000270142 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
SOD1-201ENST00000270142 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
SOD1-201ENST00000270142 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
SOD1-201ENST00000270142 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
SOD1-201ENST00000270142 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
SOD1-201ENST00000270142 PSPHP1O15172 72 aa4.98□□□□□ -1.61
SOD1-201ENST00000270142 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
SOD1-201ENST00000270142 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
SOD1-201ENST00000270142 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
SOD1-201ENST00000270142 PRO0628Q9UI54 55 aa4.95□□□□□ -1.62
SOD1-201ENST00000270142 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
SOD1-201ENST00000270142 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
SOD1-201ENST00000270142 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
SOD1-201ENST00000270142 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
SOD1-201ENST00000270142 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
SOD1-201ENST00000270142 ATP5EP56381 51 aaPredicted RBP4.82□□□□□ -1.64
SOD1-201ENST00000270142 UQCR11O14957 56 aa4.8□□□□□ -1.64
SOD1-201ENST00000270142 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
SOD1-201ENST00000270142 PMAIP1Q13794 54 aa4.69□□□□□ -1.66
SOD1-201ENST00000270142 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
SOD1-201ENST00000270142 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
SOD1-201ENST00000270142 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
SOD1-201ENST00000270142 K7ERS5 55 aa4.61□□□□□ -1.67
SOD1-201ENST00000270142 MT1AP04731 61 aa4.6□□□□□ -1.67
SOD1-201ENST00000270142 TMEM258P61165 79 aa4.6□□□□□ -1.67
SOD1-201ENST00000270142 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
SOD1-201ENST00000270142 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
SOD1-201ENST00000270142 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
SOD1-201ENST00000270142 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SOD1-201ENST00000270142 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
SOD1-201ENST00000270142 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
SOD1-201ENST00000270142 A6NED7 52 aa4.37□□□□□ -1.71
SOD1-201ENST00000270142 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
SOD1-201ENST00000270142 MT3P25713 68 aa4.36□□□□□ -1.71
SOD1-201ENST00000270142 Q1T7F1 81 aa4.36□□□□□ -1.71
SOD1-201ENST00000270142 CDC42SE1Q9NRR8 79 aa4.36□□□□□ -1.71
SOD1-201ENST00000270142 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
SOD1-201ENST00000270142 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
SOD1-201ENST00000270142 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
SOD1-201ENST00000270142 ROMO1P60602 79 aa4.27□□□□□ -1.73
SOD1-201ENST00000270142 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
SOD1-201ENST00000270142 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
SOD1-201ENST00000270142 LCE1FQ5T754 118 aa4□□□□□ -1.77
SOD1-201ENST00000270142 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
SOD1-201ENST00000270142 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
SOD1-201ENST00000270142 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SOD1-201ENST00000270142 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SOD1-201ENST00000270142 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
SOD1-201ENST00000270142 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
SOD1-201ENST00000270142 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
SOD1-201ENST00000270142 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
SOD1-201ENST00000270142 INE1O15225 51 aa3.19□□□□□ -1.9
SOD1-201ENST00000270142 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
SOD1-201ENST00000270142 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
SOD1-201ENST00000270142 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
SOD1-201ENST00000270142 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
SOD1-201ENST00000270142 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SOD1-201ENST00000270142 PRM1P04553 51 aa2.19□□□□□ -2.06
SOD1-201ENST00000270142 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 69.5 ms