RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
RAB40B-201ENST00000269347 KRTAP4-3Q9BYR4 195 aa7.9□□□□□ -1.15
RAB40B-201ENST00000269347 KRTAP19-4Q3LI73 84 aa7.84□□□□□ -1.15
RAB40B-201ENST00000269347 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
RAB40B-201ENST00000269347 KRTAP19-3Q7Z4W3 81 aa7.81□□□□□ -1.16
RAB40B-201ENST00000269347 SPRR2FQ96RM1 72 aa7.81□□□□□ -1.16
RAB40B-201ENST00000269347 MT1MQ8N339 61 aa7.76□□□□□ -1.17
RAB40B-201ENST00000269347 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.17
RAB40B-201ENST00000269347 MDN1Q9NU22 5596 aa7.7□□□□□ -1.18
RAB40B-201ENST00000269347 MT1GP13640 62 aa7.7□□□□□ -1.18
RAB40B-201ENST00000269347 INE1O15225 51 aa7.68□□□□□ -1.18
RAB40B-201ENST00000269347 DSTQ03001 7570 aaKnown RBP7.67□□□□□ -1.18
RAB40B-201ENST00000269347 LCE5AQ5TCM9 118 aa7.66□□□□□ -1.18
RAB40B-201ENST00000269347 KRTAP5-9P26371 169 aa7.5□□□□□ -1.21
RAB40B-201ENST00000269347 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
RAB40B-201ENST00000269347 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
RAB40B-201ENST00000269347 KRTAP2-1Q9BYU5 128 aa7.48□□□□□ -1.21
RAB40B-201ENST00000269347 LCE1AQ5T7P2 110 aa7.43□□□□□ -1.22
RAB40B-201ENST00000269347 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.27□□□□□ -1.25
RAB40B-201ENST00000269347 SPRR2EP22531 72 aa7.25□□□□□ -1.25
RAB40B-201ENST00000269347 SPRR2BP35325 72 aa7.25□□□□□ -1.25
RAB40B-201ENST00000269347 SPRR2AP35326 72 aa7.25□□□□□ -1.25
RAB40B-201ENST00000269347 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
RAB40B-201ENST00000269347 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
RAB40B-201ENST00000269347 KRTAP6-1Q3LI64 71 aa6.98□□□□□ -1.29
RAB40B-201ENST00000269347 KRTAP5-5Q701N2 237 aaPredicted RBP6.97□□□□□ -1.29
RAB40B-201ENST00000269347 SPRR2DP22532 72 aa6.95□□□□□ -1.3
RAB40B-201ENST00000269347 SYNE1Q8NF91 8797 aaKnown RBP6.94□□□□□ -1.3
RAB40B-201ENST00000269347 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
RAB40B-201ENST00000269347 MT1AP04731 61 aa6.85□□□□□ -1.31
RAB40B-201ENST00000269347 NEBP20929 6669 aa6.79□□□□□ -1.32
RAB40B-201ENST00000269347 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
RAB40B-201ENST00000269347 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
RAB40B-201ENST00000269347 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
RAB40B-201ENST00000269347 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
RAB40B-201ENST00000269347 KRTAP5-4Q6L8H1 288 aa6.38□□□□□ -1.39
RAB40B-201ENST00000269347 KRTAP6-2Q3LI66 62 aa6.32□□□□□ -1.4
RAB40B-201ENST00000269347 LCE3DQ9BYE3 92 aa6.26□□□□□ -1.41
RAB40B-201ENST00000269347 OBSCNQ5VST9 7968 aa6.25□□□□□ -1.41
RAB40B-201ENST00000269347 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
RAB40B-201ENST00000269347 LCE3EQ5T5B0 92 aa6.17□□□□□ -1.42
RAB40B-201ENST00000269347 MT4P47944 62 aa6.16□□□□□ -1.42
RAB40B-201ENST00000269347 MT3P25713 68 aa6.12□□□□□ -1.43
RAB40B-201ENST00000269347 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
RAB40B-201ENST00000269347 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
RAB40B-201ENST00000269347 KRTAP2-2Q9BYT5 123 aa6□□□□□ -1.45
RAB40B-201ENST00000269347 KRTAP20-2Q3LI61 65 aa6□□□□□ -1.45
RAB40B-201ENST00000269347 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
RAB40B-201ENST00000269347 KRTAP20-1Q3LI63 56 aa5.87□□□□□ -1.47
RAB40B-201ENST00000269347 KRTAP5-2Q701N4 177 aa5.87□□□□□ -1.47
RAB40B-201ENST00000269347 PRM1P04553 51 aa5.77□□□□□ -1.49
RAB40B-201ENST00000269347 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
RAB40B-201ENST00000269347 MUC5ACP98088 5654 aa5.27□□□□□ -1.57
RAB40B-201ENST00000269347 LCE1EQ5T753 118 aa5.15□□□□□ -1.58
RAB40B-201ENST00000269347 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
RAB40B-201ENST00000269347 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
RAB40B-201ENST00000269347 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
RAB40B-201ENST00000269347 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
RAB40B-201ENST00000269347 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
RAB40B-201ENST00000269347 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
RAB40B-201ENST00000269347 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
RAB40B-201ENST00000269347 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
RAB40B-201ENST00000269347 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.65
RAB40B-201ENST00000269347 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
RAB40B-201ENST00000269347 KRTAP21-2Q3LI59 83 aa4.54□□□□□ -1.68
RAB40B-201ENST00000269347 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
RAB40B-201ENST00000269347 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
RAB40B-201ENST00000269347 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
RAB40B-201ENST00000269347 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
RAB40B-201ENST00000269347 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
RAB40B-201ENST00000269347 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
RAB40B-201ENST00000269347 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
RAB40B-201ENST00000269347 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
RAB40B-201ENST00000269347 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
RAB40B-201ENST00000269347 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
RAB40B-201ENST00000269347 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
RAB40B-201ENST00000269347 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 109 ms