RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MT1EP04732 61 aa5.13□□□□□ -1.59
TIMP3-201ENST00000266085 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
TIMP3-201ENST00000266085 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
TIMP3-201ENST00000266085 MUC2Q02817 5179 aa5.11□□□□□ -1.59
TIMP3-201ENST00000266085 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
TIMP3-201ENST00000266085 MT1MQ8N339 61 aa4.95□□□□□ -1.62
TIMP3-201ENST00000266085 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
TIMP3-201ENST00000266085 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
TIMP3-201ENST00000266085 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
TIMP3-201ENST00000266085 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
TIMP3-201ENST00000266085 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
TIMP3-201ENST00000266085 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
TIMP3-201ENST00000266085 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
TIMP3-201ENST00000266085 MT4P47944 62 aa4.7□□□□□ -1.66
TIMP3-201ENST00000266085 MT3P25713 68 aa4.69□□□□□ -1.66
TIMP3-201ENST00000266085 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
TIMP3-201ENST00000266085 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.68
TIMP3-201ENST00000266085 USH2AO75445 5202 aa4.58□□□□□ -1.68
TIMP3-201ENST00000266085 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
TIMP3-201ENST00000266085 MT1AP04731 61 aa4.54□□□□□ -1.68
TIMP3-201ENST00000266085 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
TIMP3-201ENST00000266085 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
TIMP3-201ENST00000266085 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
TIMP3-201ENST00000266085 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.69
TIMP3-201ENST00000266085 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
TIMP3-201ENST00000266085 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
TIMP3-201ENST00000266085 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
TIMP3-201ENST00000266085 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
TIMP3-201ENST00000266085 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
TIMP3-201ENST00000266085 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
TIMP3-201ENST00000266085 PRM1P04553 51 aa4.39□□□□□ -1.71
TIMP3-201ENST00000266085 KMT2DO14686 5537 aa4.39□□□□□ -1.71
TIMP3-201ENST00000266085 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
TIMP3-201ENST00000266085 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
TIMP3-201ENST00000266085 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
TIMP3-201ENST00000266085 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
TIMP3-201ENST00000266085 MACF1Q9UPN3 7388 aaKnown RBP4.29□□□□□ -1.72
TIMP3-201ENST00000266085 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
TIMP3-201ENST00000266085 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
TIMP3-201ENST00000266085 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
TIMP3-201ENST00000266085 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
TIMP3-201ENST00000266085 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
TIMP3-201ENST00000266085 LCE4AQ5TA78 99 aa4.15□□□□□ -1.74
TIMP3-201ENST00000266085 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
TIMP3-201ENST00000266085 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
TIMP3-201ENST00000266085 NEBP20929 6669 aa3.95□□□□□ -1.78
TIMP3-201ENST00000266085 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
TIMP3-201ENST00000266085 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
TIMP3-201ENST00000266085 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
TIMP3-201ENST00000266085 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
TIMP3-201ENST00000266085 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
TIMP3-201ENST00000266085 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
TIMP3-201ENST00000266085 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
TIMP3-201ENST00000266085 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
TIMP3-201ENST00000266085 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
TIMP3-201ENST00000266085 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
TIMP3-201ENST00000266085 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
TIMP3-201ENST00000266085 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
TIMP3-201ENST00000266085 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
TIMP3-201ENST00000266085 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
TIMP3-201ENST00000266085 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
TIMP3-201ENST00000266085 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
TIMP3-201ENST00000266085 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
TIMP3-201ENST00000266085 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
TIMP3-201ENST00000266085 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
TIMP3-201ENST00000266085 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
TIMP3-201ENST00000266085 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
TIMP3-201ENST00000266085 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
TIMP3-201ENST00000266085 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
TIMP3-201ENST00000266085 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
TIMP3-201ENST00000266085 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
TIMP3-201ENST00000266085 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
TIMP3-201ENST00000266085 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
TIMP3-201ENST00000266085 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
TIMP3-201ENST00000266085 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
TIMP3-201ENST00000266085 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
TIMP3-201ENST00000266085 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms