RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
SRF-201ENST00000265354 MT1LQ93083 61 aa5.65□□□□□ -1.51
SRF-201ENST00000265354 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
SRF-201ENST00000265354 MT1EP04732 61 aa5.57□□□□□ -1.52
SRF-201ENST00000265354 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
SRF-201ENST00000265354 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.54
SRF-201ENST00000265354 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
SRF-201ENST00000265354 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
SRF-201ENST00000265354 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
SRF-201ENST00000265354 SPRR2EP22531 72 aa5.42□□□□□ -1.54
SRF-201ENST00000265354 SPRR2BP35325 72 aa5.42□□□□□ -1.54
SRF-201ENST00000265354 SPRR2AP35326 72 aa5.42□□□□□ -1.54
SRF-201ENST00000265354 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
SRF-201ENST00000265354 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
SRF-201ENST00000265354 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
SRF-201ENST00000265354 PRM1P04553 51 aa5.32□□□□□ -1.56
SRF-201ENST00000265354 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
SRF-201ENST00000265354 MT1MQ8N339 61 aa5.29□□□□□ -1.56
SRF-201ENST00000265354 LCE3EQ5T5B0 92 aa5.25□□□□□ -1.57
SRF-201ENST00000265354 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
SRF-201ENST00000265354 SPRR2DP22532 72 aa5.19□□□□□ -1.58
SRF-201ENST00000265354 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
SRF-201ENST00000265354 MUC19Q7Z5P9 8384 aa5.11□□□□□ -1.59
SRF-201ENST00000265354 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
SRF-201ENST00000265354 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
SRF-201ENST00000265354 LCE2DQ5TA82 110 aaPredicted RBP5□□□□□ -1.61
SRF-201ENST00000265354 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
SRF-201ENST00000265354 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
SRF-201ENST00000265354 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.62
SRF-201ENST00000265354 MT4P47944 62 aa4.82□□□□□ -1.64
SRF-201ENST00000265354 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
SRF-201ENST00000265354 MT1AP04731 61 aa4.74□□□□□ -1.65
SRF-201ENST00000265354 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
SRF-201ENST00000265354 MT3P25713 68 aa4.65□□□□□ -1.66
SRF-201ENST00000265354 MDN1Q9NU22 5596 aa4.65□□□□□ -1.67
SRF-201ENST00000265354 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
SRF-201ENST00000265354 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
SRF-201ENST00000265354 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
SRF-201ENST00000265354 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
SRF-201ENST00000265354 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
SRF-201ENST00000265354 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
SRF-201ENST00000265354 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
SRF-201ENST00000265354 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
SRF-201ENST00000265354 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
SRF-201ENST00000265354 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
SRF-201ENST00000265354 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
SRF-201ENST00000265354 NEBP20929 6669 aa4.04□□□□□ -1.76
SRF-201ENST00000265354 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
SRF-201ENST00000265354 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
SRF-201ENST00000265354 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
SRF-201ENST00000265354 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
SRF-201ENST00000265354 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
SRF-201ENST00000265354 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SRF-201ENST00000265354 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
SRF-201ENST00000265354 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
SRF-201ENST00000265354 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
SRF-201ENST00000265354 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
SRF-201ENST00000265354 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
SRF-201ENST00000265354 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
SRF-201ENST00000265354 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
SRF-201ENST00000265354 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
SRF-201ENST00000265354 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
SRF-201ENST00000265354 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.89
SRF-201ENST00000265354 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
SRF-201ENST00000265354 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
SRF-201ENST00000265354 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
SRF-201ENST00000265354 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
SRF-201ENST00000265354 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
SRF-201ENST00000265354 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
SRF-201ENST00000265354 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
SRF-201ENST00000265354 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
SRF-201ENST00000265354 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
SRF-201ENST00000265354 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
SRF-201ENST00000265354 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
SRF-201ENST00000265354 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
SRF-201ENST00000265354 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SRF-201ENST00000265354 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 75.1 ms