RNA–Protein interactions for RNA: ENST00000264808.7

PRDM5-201, Transcript of PR/SET domain 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM5, Length 5,330 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-201ENST00000264808 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
PRDM5-201ENST00000264808 LCE3DQ9BYE3 92 aa5.83□□□□□ -1.48
PRDM5-201ENST00000264808 UBR4Q5T4S7 5183 aa5.79□□□□□ -1.48
PRDM5-201ENST00000264808 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
PRDM5-201ENST00000264808 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
PRDM5-201ENST00000264808 MT3P25713 68 aa5.75□□□□□ -1.49
PRDM5-201ENST00000264808 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
PRDM5-201ENST00000264808 LCE3EQ5T5B0 92 aa5.74□□□□□ -1.49
PRDM5-201ENST00000264808 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
PRDM5-201ENST00000264808 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
PRDM5-201ENST00000264808 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
PRDM5-201ENST00000264808 MT4P47944 62 aa5.67□□□□□ -1.5
PRDM5-201ENST00000264808 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
PRDM5-201ENST00000264808 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
PRDM5-201ENST00000264808 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
PRDM5-201ENST00000264808 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
PRDM5-201ENST00000264808 MT1AP04731 61 aa5.53□□□□□ -1.52
PRDM5-201ENST00000264808 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
PRDM5-201ENST00000264808 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
PRDM5-201ENST00000264808 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
PRDM5-201ENST00000264808 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
PRDM5-201ENST00000264808 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
PRDM5-201ENST00000264808 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
PRDM5-201ENST00000264808 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
PRDM5-201ENST00000264808 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
PRDM5-201ENST00000264808 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
PRDM5-201ENST00000264808 MUC2Q02817 5179 aa5.22□□□□□ -1.57
PRDM5-201ENST00000264808 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
PRDM5-201ENST00000264808 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
PRDM5-201ENST00000264808 PRM1P04553 51 aa5.17□□□□□ -1.58
PRDM5-201ENST00000264808 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
PRDM5-201ENST00000264808 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
PRDM5-201ENST00000264808 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
PRDM5-201ENST00000264808 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
PRDM5-201ENST00000264808 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
PRDM5-201ENST00000264808 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
PRDM5-201ENST00000264808 USH2AO75445 5202 aa4.93□□□□□ -1.62
PRDM5-201ENST00000264808 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
PRDM5-201ENST00000264808 NEBP20929 6669 aa4.76□□□□□ -1.65
PRDM5-201ENST00000264808 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
PRDM5-201ENST00000264808 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
PRDM5-201ENST00000264808 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
PRDM5-201ENST00000264808 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
PRDM5-201ENST00000264808 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
PRDM5-201ENST00000264808 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
PRDM5-201ENST00000264808 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
PRDM5-201ENST00000264808 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
PRDM5-201ENST00000264808 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
PRDM5-201ENST00000264808 KMT2DO14686 5537 aa4.33□□□□□ -1.72
PRDM5-201ENST00000264808 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
PRDM5-201ENST00000264808 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
PRDM5-201ENST00000264808 MDN1Q9NU22 5596 aa4.16□□□□□ -1.74
PRDM5-201ENST00000264808 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
PRDM5-201ENST00000264808 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
PRDM5-201ENST00000264808 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
PRDM5-201ENST00000264808 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
PRDM5-201ENST00000264808 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
PRDM5-201ENST00000264808 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
PRDM5-201ENST00000264808 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
PRDM5-201ENST00000264808 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
PRDM5-201ENST00000264808 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
PRDM5-201ENST00000264808 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
PRDM5-201ENST00000264808 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
PRDM5-201ENST00000264808 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
PRDM5-201ENST00000264808 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
PRDM5-201ENST00000264808 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
PRDM5-201ENST00000264808 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
PRDM5-201ENST00000264808 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
PRDM5-201ENST00000264808 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
PRDM5-201ENST00000264808 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
PRDM5-201ENST00000264808 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
PRDM5-201ENST00000264808 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
PRDM5-201ENST00000264808 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
PRDM5-201ENST00000264808 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
PRDM5-201ENST00000264808 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
PRDM5-201ENST00000264808 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
PRDM5-201ENST00000264808 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 83.9 ms