RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
DNMT3A-201ENST00000264709 LPAP08519 4548 aa3.5□□□□□ -1.85
DNMT3A-201ENST00000264709 EPPK1P58107 5090 aaKnown RBP3.5□□□□□ -1.85
DNMT3A-201ENST00000264709 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
DNMT3A-201ENST00000264709 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
DNMT3A-201ENST00000264709 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
DNMT3A-201ENST00000264709 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
DNMT3A-201ENST00000264709 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
DNMT3A-201ENST00000264709 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
DNMT3A-201ENST00000264709 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
DNMT3A-201ENST00000264709 MUC2Q02817 5179 aa3.38□□□□□ -1.87
DNMT3A-201ENST00000264709 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
DNMT3A-201ENST00000264709 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
DNMT3A-201ENST00000264709 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
DNMT3A-201ENST00000264709 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
DNMT3A-201ENST00000264709 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
DNMT3A-201ENST00000264709 MT4P47944 62 aa3.28□□□□□ -1.88
DNMT3A-201ENST00000264709 LCE2AQ5TA79 106 aaPredicted RBP3.25□□□□□ -1.89
DNMT3A-201ENST00000264709 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
DNMT3A-201ENST00000264709 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
DNMT3A-201ENST00000264709 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
DNMT3A-201ENST00000264709 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
DNMT3A-201ENST00000264709 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
DNMT3A-201ENST00000264709 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
DNMT3A-201ENST00000264709 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
DNMT3A-201ENST00000264709 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
DNMT3A-201ENST00000264709 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
DNMT3A-201ENST00000264709 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.93
DNMT3A-201ENST00000264709 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
DNMT3A-201ENST00000264709 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
DNMT3A-201ENST00000264709 USH2AO75445 5202 aa3.01□□□□□ -1.93
DNMT3A-201ENST00000264709 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
DNMT3A-201ENST00000264709 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
DNMT3A-201ENST00000264709 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
DNMT3A-201ENST00000264709 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
DNMT3A-201ENST00000264709 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
DNMT3A-201ENST00000264709 KMT2DO14686 5537 aa2.9□□□□□ -1.94
DNMT3A-201ENST00000264709 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
DNMT3A-201ENST00000264709 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
DNMT3A-201ENST00000264709 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
DNMT3A-201ENST00000264709 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
DNMT3A-201ENST00000264709 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
DNMT3A-201ENST00000264709 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
DNMT3A-201ENST00000264709 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
DNMT3A-201ENST00000264709 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
DNMT3A-201ENST00000264709 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.67□□□□□ -1.98
DNMT3A-201ENST00000264709 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
DNMT3A-201ENST00000264709 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
DNMT3A-201ENST00000264709 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
DNMT3A-201ENST00000264709 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
DNMT3A-201ENST00000264709 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
DNMT3A-201ENST00000264709 NEBP20929 6669 aa2.33□□□□□ -2.04
DNMT3A-201ENST00000264709 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
DNMT3A-201ENST00000264709 KRTAP4-6Q9BYQ5 205 aa2.25□□□□□ -2.05
DNMT3A-201ENST00000264709 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
DNMT3A-201ENST00000264709 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
DNMT3A-201ENST00000264709 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
DNMT3A-201ENST00000264709 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
DNMT3A-201ENST00000264709 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
DNMT3A-201ENST00000264709 MACF1Q9UPN3 7388 aaKnown RBP2.13□□□□□ -2.07
DNMT3A-201ENST00000264709 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
DNMT3A-201ENST00000264709 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
DNMT3A-201ENST00000264709 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
DNMT3A-201ENST00000264709 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
DNMT3A-201ENST00000264709 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
DNMT3A-201ENST00000264709 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
DNMT3A-201ENST00000264709 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
DNMT3A-201ENST00000264709 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
DNMT3A-201ENST00000264709 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
DNMT3A-201ENST00000264709 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
DNMT3A-201ENST00000264709 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
DNMT3A-201ENST00000264709 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
DNMT3A-201ENST00000264709 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
DNMT3A-201ENST00000264709 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
DNMT3A-201ENST00000264709 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
DNMT3A-201ENST00000264709 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
DNMT3A-201ENST00000264709 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 10.1 ms