RNA–Protein interactions for RNA: ENST00000264705.8

CAD-201, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAD, Length 7,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-201ENST00000264705 KRTAP19-2Q3LHN2 52 aa3.73□□□□□ -1.81
CAD-201ENST00000264705 LRP2P98164 4655 aa3.64□□□□□ -1.83
CAD-201ENST00000264705 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
CAD-201ENST00000264705 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
CAD-201ENST00000264705 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
CAD-201ENST00000264705 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
CAD-201ENST00000264705 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
CAD-201ENST00000264705 HYDINQ4G0P3 5121 aa3.61□□□□□ -1.83
CAD-201ENST00000264705 HERC2O95714 4834 aa3.61□□□□□ -1.83
CAD-201ENST00000264705 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.84
CAD-201ENST00000264705 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
CAD-201ENST00000264705 MT1AP04731 61 aa3.57□□□□□ -1.84
CAD-201ENST00000264705 KIAA1109Q2LD37 5005 aa3.56□□□□□ -1.84
CAD-201ENST00000264705 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
CAD-201ENST00000264705 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
CAD-201ENST00000264705 KMT2CQ8NEZ4 4911 aaKnown RBP3.51□□□□□ -1.85
CAD-201ENST00000264705 PCLOQ9Y6V0 5065 aa3.5□□□□□ -1.85
CAD-201ENST00000264705 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
CAD-201ENST00000264705 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
CAD-201ENST00000264705 LCE2AQ5TA79 106 aaPredicted RBP3.48□□□□□ -1.85
CAD-201ENST00000264705 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
CAD-201ENST00000264705 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
CAD-201ENST00000264705 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
CAD-201ENST00000264705 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
CAD-201ENST00000264705 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
CAD-201ENST00000264705 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
CAD-201ENST00000264705 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
CAD-201ENST00000264705 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
CAD-201ENST00000264705 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
CAD-201ENST00000264705 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
CAD-201ENST00000264705 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
CAD-201ENST00000264705 EPPK1P58107 5090 aaKnown RBP3.2□□□□□ -1.9
CAD-201ENST00000264705 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
CAD-201ENST00000264705 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
CAD-201ENST00000264705 ABCA13Q86UQ4 5058 aa3.08□□□□□ -1.92
CAD-201ENST00000264705 RNF213Q63HN8 5207 aa3.05□□□□□ -1.92
CAD-201ENST00000264705 MUC2Q02817 5179 aa2.96□□□□□ -1.93
CAD-201ENST00000264705 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
CAD-201ENST00000264705 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
CAD-201ENST00000264705 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
CAD-201ENST00000264705 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
CAD-201ENST00000264705 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
CAD-201ENST00000264705 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
CAD-201ENST00000264705 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
CAD-201ENST00000264705 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CAD-201ENST00000264705 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
CAD-201ENST00000264705 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
CAD-201ENST00000264705 NEBP20929 6669 aa2.64□□□□□ -1.99
CAD-201ENST00000264705 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
CAD-201ENST00000264705 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
CAD-201ENST00000264705 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
CAD-201ENST00000264705 KMT2DO14686 5537 aa2.5□□□□□ -2.01
CAD-201ENST00000264705 USH2AO75445 5202 aa2.47□□□□□ -2.01
CAD-201ENST00000264705 FCGBPQ9Y6R7 5405 aaPredicted RBP2.45□□□□□ -2.02
CAD-201ENST00000264705 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
CAD-201ENST00000264705 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
CAD-201ENST00000264705 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
CAD-201ENST00000264705 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CAD-201ENST00000264705 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
CAD-201ENST00000264705 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
CAD-201ENST00000264705 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
CAD-201ENST00000264705 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CAD-201ENST00000264705 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
CAD-201ENST00000264705 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
CAD-201ENST00000264705 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
CAD-201ENST00000264705 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
CAD-201ENST00000264705 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
CAD-201ENST00000264705 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
CAD-201ENST00000264705 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
CAD-201ENST00000264705 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
CAD-201ENST00000264705 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
CAD-201ENST00000264705 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CAD-201ENST00000264705 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
CAD-201ENST00000264705 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
CAD-201ENST00000264705 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
CAD-201ENST00000264705 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
CAD-201ENST00000264705 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 73.7 ms