RNA–Protein interactions for RNA: ENST00000264160.8

R3HDM1-201, Transcript of R3H domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene R3HDM1, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-201ENST00000264160 MT1GP13640 62 aa1.8□□□□□ -2.12
R3HDM1-201ENST00000264160 LCE3CQ5T5A8 94 aa1.78□□□□□ -2.12
R3HDM1-201ENST00000264160 KRTAP9-9Q9BYP9 154 aa1.76□□□□□ -2.13
R3HDM1-201ENST00000264160 KRTAP9-4Q9BYQ2 154 aa1.76□□□□□ -2.13
R3HDM1-201ENST00000264160 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
R3HDM1-201ENST00000264160 KRTAP12-4P60329 112 aa1.75□□□□□ -2.13
R3HDM1-201ENST00000264160 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
R3HDM1-201ENST00000264160 SYNE2Q8WXH0 6885 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-201ENST00000264160 MT1EP04732 61 aa1.72□□□□□ -2.13
R3HDM1-201ENST00000264160 KRTAP19-3Q7Z4W3 81 aa1.72□□□□□ -2.13
R3HDM1-201ENST00000264160 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
R3HDM1-201ENST00000264160 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
R3HDM1-201ENST00000264160 KRTAP4-7Q9BYR0 210 aa1.71□□□□□ -2.14
R3HDM1-201ENST00000264160 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
R3HDM1-201ENST00000264160 MT1LQ93083 61 aa1.7□□□□□ -2.14
R3HDM1-201ENST00000264160 LOC100996750A0A140TA64 210 aa1.69□□□□□ -2.14
R3HDM1-201ENST00000264160 LCE1EQ5T753 118 aa1.69□□□□□ -2.14
R3HDM1-201ENST00000264160 KRTAP4-6Q9BYQ5 205 aa1.69□□□□□ -2.14
R3HDM1-201ENST00000264160 LCE1AQ5T7P2 110 aa1.68□□□□□ -2.14
R3HDM1-201ENST00000264160 KRTAP9-7A8MTY7 169 aa1.67□□□□□ -2.14
R3HDM1-201ENST00000264160 LCE1FQ5T754 118 aa1.66□□□□□ -2.14
R3HDM1-201ENST00000264160 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.15
R3HDM1-201ENST00000264160 KRTAP4-3Q9BYR4 195 aa1.65□□□□□ -2.15
R3HDM1-201ENST00000264160 LCE3BQ5TA77 95 aa1.64□□□□□ -2.15
R3HDM1-201ENST00000264160 KRTAP9-6A8MVA2 160 aa1.63□□□□□ -2.15
R3HDM1-201ENST00000264160 MDN1Q9NU22 5596 aa1.63□□□□□ -2.15
R3HDM1-201ENST00000264160 OBSCNQ5VST9 7968 aa1.63□□□□□ -2.15
R3HDM1-201ENST00000264160 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.63□□□□□ -2.15
R3HDM1-201ENST00000264160 KRTAP2-3P0C7H8 128 aa1.62□□□□□ -2.15
R3HDM1-201ENST00000264160 KRTAP2-4Q9BYR9 128 aa1.62□□□□□ -2.15
R3HDM1-201ENST00000264160 MT1MQ8N339 61 aa1.62□□□□□ -2.15
R3HDM1-201ENST00000264160 KRTAP2-2Q9BYT5 123 aa1.62□□□□□ -2.15
R3HDM1-201ENST00000264160 KRTAP5-9P26371 169 aa1.61□□□□□ -2.15
R3HDM1-201ENST00000264160 LCE5AQ5TCM9 118 aa1.6□□□□□ -2.15
R3HDM1-201ENST00000264160 MT3P25713 68 aa1.6□□□□□ -2.15
R3HDM1-201ENST00000264160 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
R3HDM1-201ENST00000264160 LCE1DQ5T752 114 aa1.58□□□□□ -2.16
R3HDM1-201ENST00000264160 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
R3HDM1-201ENST00000264160 LCE4AQ5TA78 99 aa1.56□□□□□ -2.16
R3HDM1-201ENST00000264160 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
R3HDM1-201ENST00000264160 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
R3HDM1-201ENST00000264160 MT1AP04731 61 aa1.52□□□□□ -2.17
R3HDM1-201ENST00000264160 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
R3HDM1-201ENST00000264160 MT4P47944 62 aa1.51□□□□□ -2.17
R3HDM1-201ENST00000264160 NEBP20929 6669 aa1.5□□□□□ -2.17
R3HDM1-201ENST00000264160 LCE3EQ5T5B0 92 aa1.49□□□□□ -2.17
R3HDM1-201ENST00000264160 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
R3HDM1-201ENST00000264160 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
R3HDM1-201ENST00000264160 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
R3HDM1-201ENST00000264160 KRTAP4-12Q9BQ66 201 aa1.38□□□□□ -2.19
R3HDM1-201ENST00000264160 KRTAP4-9Q9BYQ8 210 aa1.38□□□□□ -2.19
R3HDM1-201ENST00000264160 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
R3HDM1-201ENST00000264160 KRTAP5-2Q701N4 177 aa1.36□□□□□ -2.19
R3HDM1-201ENST00000264160 KRTAP5-4Q6L8H1 288 aa1.35□□□□□ -2.19
R3HDM1-201ENST00000264160 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
R3HDM1-201ENST00000264160 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
R3HDM1-201ENST00000264160 KRTAP5-3Q6L8H2 238 aa1.31□□□□□ -2.2
R3HDM1-201ENST00000264160 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
R3HDM1-201ENST00000264160 KRTAP4-2Q9BYR5 136 aa1.27□□□□□ -2.21
R3HDM1-201ENST00000264160 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
R3HDM1-201ENST00000264160 PRM1P04553 51 aa1.22□□□□□ -2.21
R3HDM1-201ENST00000264160 KRTAP4-11Q9BYQ6 195 aa1.2□□□□□ -2.22
R3HDM1-201ENST00000264160 LCE1CQ5T751 118 aa1.15□□□□□ -2.23
R3HDM1-201ENST00000264160 AHNAK2Q8IVF2 5795 aa1.12□□□□□ -2.23
R3HDM1-201ENST00000264160 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
R3HDM1-201ENST00000264160 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
R3HDM1-201ENST00000264160 KRTAP5-8O75690 187 aa1.06□□□□□ -2.24
R3HDM1-201ENST00000264160 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
R3HDM1-201ENST00000264160 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
R3HDM1-201ENST00000264160 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.24
R3HDM1-201ENST00000264160 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
R3HDM1-201ENST00000264160 KRTAP21-2Q3LI59 83 aa0.93□□□□□ -2.26
R3HDM1-201ENST00000264160 KRTAP5-11Q6L8G4 156 aa0.89□□□□□ -2.27
R3HDM1-201ENST00000264160 KRTAP4-4Q9BYR3 166 aa0.88□□□□□ -2.27
R3HDM1-201ENST00000264160 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
R3HDM1-201ENST00000264160 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
R3HDM1-201ENST00000264160 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 108 ms