RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
CHMP2B-201ENST00000263780 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
CHMP2B-201ENST00000263780 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
CHMP2B-201ENST00000263780 MT1GP13640 62 aa3.89□□□□□ -1.79
CHMP2B-201ENST00000263780 MT1MQ8N339 61 aa3.85□□□□□ -1.79
CHMP2B-201ENST00000263780 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
CHMP2B-201ENST00000263780 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
CHMP2B-201ENST00000263780 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
CHMP2B-201ENST00000263780 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
CHMP2B-201ENST00000263780 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
CHMP2B-201ENST00000263780 MT1AP04731 61 aa3.73□□□□□ -1.81
CHMP2B-201ENST00000263780 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
CHMP2B-201ENST00000263780 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.81
CHMP2B-201ENST00000263780 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
CHMP2B-201ENST00000263780 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
CHMP2B-201ENST00000263780 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
CHMP2B-201ENST00000263780 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
CHMP2B-201ENST00000263780 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
CHMP2B-201ENST00000263780 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
CHMP2B-201ENST00000263780 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
CHMP2B-201ENST00000263780 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
CHMP2B-201ENST00000263780 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
CHMP2B-201ENST00000263780 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
CHMP2B-201ENST00000263780 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
CHMP2B-201ENST00000263780 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
CHMP2B-201ENST00000263780 PRM1P04553 51 aa3.52□□□□□ -1.85
CHMP2B-201ENST00000263780 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
CHMP2B-201ENST00000263780 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
CHMP2B-201ENST00000263780 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
CHMP2B-201ENST00000263780 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
CHMP2B-201ENST00000263780 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
CHMP2B-201ENST00000263780 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
CHMP2B-201ENST00000263780 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
CHMP2B-201ENST00000263780 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
CHMP2B-201ENST00000263780 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
CHMP2B-201ENST00000263780 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
CHMP2B-201ENST00000263780 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
CHMP2B-201ENST00000263780 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
CHMP2B-201ENST00000263780 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
CHMP2B-201ENST00000263780 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
CHMP2B-201ENST00000263780 MT3P25713 68 aa3.19□□□□□ -1.9
CHMP2B-201ENST00000263780 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
CHMP2B-201ENST00000263780 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
CHMP2B-201ENST00000263780 SPRR2AP35326 72 aa3.15□□□□□ -1.91
CHMP2B-201ENST00000263780 SPRR2EP22531 72 aa3.13□□□□□ -1.91
CHMP2B-201ENST00000263780 SPRR2BP35325 72 aa3.13□□□□□ -1.91
CHMP2B-201ENST00000263780 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
CHMP2B-201ENST00000263780 NEBP20929 6669 aa3.01□□□□□ -1.93
CHMP2B-201ENST00000263780 SPRR2DP22532 72 aa2.99□□□□□ -1.93
CHMP2B-201ENST00000263780 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CHMP2B-201ENST00000263780 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
CHMP2B-201ENST00000263780 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
CHMP2B-201ENST00000263780 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
CHMP2B-201ENST00000263780 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
CHMP2B-201ENST00000263780 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CHMP2B-201ENST00000263780 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
CHMP2B-201ENST00000263780 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
CHMP2B-201ENST00000263780 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
CHMP2B-201ENST00000263780 MT4P47944 62 aa2.65□□□□□ -1.98
CHMP2B-201ENST00000263780 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
CHMP2B-201ENST00000263780 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
CHMP2B-201ENST00000263780 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
CHMP2B-201ENST00000263780 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
CHMP2B-201ENST00000263780 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
CHMP2B-201ENST00000263780 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
CHMP2B-201ENST00000263780 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
CHMP2B-201ENST00000263780 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.05
CHMP2B-201ENST00000263780 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
CHMP2B-201ENST00000263780 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
CHMP2B-201ENST00000263780 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
CHMP2B-201ENST00000263780 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
CHMP2B-201ENST00000263780 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
CHMP2B-201ENST00000263780 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
CHMP2B-201ENST00000263780 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
CHMP2B-201ENST00000263780 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
CHMP2B-201ENST00000263780 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
CHMP2B-201ENST00000263780 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 69.5 ms