RNA–Protein interactions for RNA: ENST00000263331.9

POLR1B-201, Transcript of RNA polymerase I subunit B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene POLR1B, Length 4,558 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-201ENST00000263331 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
POLR1B-201ENST00000263331 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
POLR1B-201ENST00000263331 MT1MQ8N339 61 aa3.95□□□□□ -1.78
POLR1B-201ENST00000263331 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
POLR1B-201ENST00000263331 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
POLR1B-201ENST00000263331 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
POLR1B-201ENST00000263331 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
POLR1B-201ENST00000263331 SPRR2EP22531 72 aa3.81□□□□□ -1.8
POLR1B-201ENST00000263331 SPRR2BP35325 72 aa3.81□□□□□ -1.8
POLR1B-201ENST00000263331 SPRR2AP35326 72 aa3.81□□□□□ -1.8
POLR1B-201ENST00000263331 SPRR2DP22532 72 aa3.67□□□□□ -1.82
POLR1B-201ENST00000263331 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
POLR1B-201ENST00000263331 MT1AP04731 61 aa3.66□□□□□ -1.82
POLR1B-201ENST00000263331 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
POLR1B-201ENST00000263331 USH2AO75445 5202 aa3.62□□□□□ -1.83
POLR1B-201ENST00000263331 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
POLR1B-201ENST00000263331 PRM1P04553 51 aa3.61□□□□□ -1.83
POLR1B-201ENST00000263331 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
POLR1B-201ENST00000263331 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
POLR1B-201ENST00000263331 MT3P25713 68 aa3.57□□□□□ -1.84
POLR1B-201ENST00000263331 KMT2DO14686 5537 aa3.54□□□□□ -1.84
POLR1B-201ENST00000263331 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
POLR1B-201ENST00000263331 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
POLR1B-201ENST00000263331 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
POLR1B-201ENST00000263331 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
POLR1B-201ENST00000263331 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
POLR1B-201ENST00000263331 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
POLR1B-201ENST00000263331 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
POLR1B-201ENST00000263331 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
POLR1B-201ENST00000263331 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
POLR1B-201ENST00000263331 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
POLR1B-201ENST00000263331 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
POLR1B-201ENST00000263331 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
POLR1B-201ENST00000263331 MT4P47944 62 aa3.2□□□□□ -1.9
POLR1B-201ENST00000263331 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
POLR1B-201ENST00000263331 KRTAP5-9P26371 169 aa3.15□□□□□ -1.9
POLR1B-201ENST00000263331 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
POLR1B-201ENST00000263331 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
POLR1B-201ENST00000263331 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
POLR1B-201ENST00000263331 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
POLR1B-201ENST00000263331 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
POLR1B-201ENST00000263331 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
POLR1B-201ENST00000263331 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
POLR1B-201ENST00000263331 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
POLR1B-201ENST00000263331 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
POLR1B-201ENST00000263331 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
POLR1B-201ENST00000263331 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.96
POLR1B-201ENST00000263331 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.97
POLR1B-201ENST00000263331 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
POLR1B-201ENST00000263331 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
POLR1B-201ENST00000263331 NEBP20929 6669 aa2.63□□□□□ -1.99
POLR1B-201ENST00000263331 LCE1EQ5T753 118 aa2.57□□□□□ -2
POLR1B-201ENST00000263331 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
POLR1B-201ENST00000263331 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
POLR1B-201ENST00000263331 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
POLR1B-201ENST00000263331 LCE1CQ5T751 118 aa2.34□□□□□ -2.04
POLR1B-201ENST00000263331 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
POLR1B-201ENST00000263331 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
POLR1B-201ENST00000263331 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
POLR1B-201ENST00000263331 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
POLR1B-201ENST00000263331 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
POLR1B-201ENST00000263331 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
POLR1B-201ENST00000263331 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
POLR1B-201ENST00000263331 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
POLR1B-201ENST00000263331 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.07
POLR1B-201ENST00000263331 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
POLR1B-201ENST00000263331 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
POLR1B-201ENST00000263331 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
POLR1B-201ENST00000263331 KRTAP5-8O75690 187 aa2□□□□□ -2.09
POLR1B-201ENST00000263331 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
POLR1B-201ENST00000263331 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
POLR1B-201ENST00000263331 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
POLR1B-201ENST00000263331 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
POLR1B-201ENST00000263331 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
POLR1B-201ENST00000263331 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
POLR1B-201ENST00000263331 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
POLR1B-201ENST00000263331 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 122.6 ms