RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
SCARF1-201ENST00000263071 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
SCARF1-201ENST00000263071 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
SCARF1-201ENST00000263071 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
SCARF1-201ENST00000263071 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
SCARF1-201ENST00000263071 MT1GP13640 62 aa4.71□□□□□ -1.66
SCARF1-201ENST00000263071 MT1LQ93083 61 aa4.69□□□□□ -1.66
SCARF1-201ENST00000263071 MT1EP04732 61 aa4.65□□□□□ -1.67
SCARF1-201ENST00000263071 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
SCARF1-201ENST00000263071 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
SCARF1-201ENST00000263071 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
SCARF1-201ENST00000263071 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
SCARF1-201ENST00000263071 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
SCARF1-201ENST00000263071 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
SCARF1-201ENST00000263071 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
SCARF1-201ENST00000263071 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
SCARF1-201ENST00000263071 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
SCARF1-201ENST00000263071 MT1MQ8N339 61 aa4.37□□□□□ -1.71
SCARF1-201ENST00000263071 PRM1P04553 51 aa4.36□□□□□ -1.71
SCARF1-201ENST00000263071 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
SCARF1-201ENST00000263071 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.72
SCARF1-201ENST00000263071 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
SCARF1-201ENST00000263071 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
SCARF1-201ENST00000263071 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
SCARF1-201ENST00000263071 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
SCARF1-201ENST00000263071 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
SCARF1-201ENST00000263071 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SCARF1-201ENST00000263071 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
SCARF1-201ENST00000263071 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
SCARF1-201ENST00000263071 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SCARF1-201ENST00000263071 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
SCARF1-201ENST00000263071 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
SCARF1-201ENST00000263071 LCE1DQ5T752 114 aa4□□□□□ -1.77
SCARF1-201ENST00000263071 MT1AP04731 61 aa3.95□□□□□ -1.78
SCARF1-201ENST00000263071 SPRR2EP22531 72 aa3.93□□□□□ -1.78
SCARF1-201ENST00000263071 SPRR2BP35325 72 aa3.93□□□□□ -1.78
SCARF1-201ENST00000263071 SPRR2AP35326 72 aa3.93□□□□□ -1.78
SCARF1-201ENST00000263071 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
SCARF1-201ENST00000263071 SPRR2DP22532 72 aa3.72□□□□□ -1.81
SCARF1-201ENST00000263071 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
SCARF1-201ENST00000263071 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
SCARF1-201ENST00000263071 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
SCARF1-201ENST00000263071 MT3P25713 68 aa3.55□□□□□ -1.84
SCARF1-201ENST00000263071 MT4P47944 62 aa3.54□□□□□ -1.84
SCARF1-201ENST00000263071 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
SCARF1-201ENST00000263071 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
SCARF1-201ENST00000263071 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
SCARF1-201ENST00000263071 NEBP20929 6669 aa3.31□□□□□ -1.88
SCARF1-201ENST00000263071 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SCARF1-201ENST00000263071 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
SCARF1-201ENST00000263071 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
SCARF1-201ENST00000263071 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
SCARF1-201ENST00000263071 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.92
SCARF1-201ENST00000263071 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
SCARF1-201ENST00000263071 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
SCARF1-201ENST00000263071 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
SCARF1-201ENST00000263071 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
SCARF1-201ENST00000263071 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
SCARF1-201ENST00000263071 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SCARF1-201ENST00000263071 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
SCARF1-201ENST00000263071 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
SCARF1-201ENST00000263071 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
SCARF1-201ENST00000263071 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
SCARF1-201ENST00000263071 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
SCARF1-201ENST00000263071 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
SCARF1-201ENST00000263071 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
SCARF1-201ENST00000263071 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
SCARF1-201ENST00000263071 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SCARF1-201ENST00000263071 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
SCARF1-201ENST00000263071 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
SCARF1-201ENST00000263071 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
SCARF1-201ENST00000263071 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
SCARF1-201ENST00000263071 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
SCARF1-201ENST00000263071 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
SCARF1-201ENST00000263071 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
SCARF1-201ENST00000263071 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
SCARF1-201ENST00000263071 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 52.9 ms