RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 KRTAP19-7Q3SYF9 63 aa6.23□□□□□ -1.41
CHCHD3-201ENST00000262570 NEBP20929 6669 aa6.22□□□□□ -1.41
CHCHD3-201ENST00000262570 ROMO1P60602 79 aa6.2□□□□□ -1.42
CHCHD3-201ENST00000262570 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
CHCHD3-201ENST00000262570 SPRR2EP22531 72 aa6.16□□□□□ -1.42
CHCHD3-201ENST00000262570 SPRR2BP35325 72 aa6.16□□□□□ -1.42
CHCHD3-201ENST00000262570 SPRR2AP35326 72 aa6.16□□□□□ -1.42
CHCHD3-201ENST00000262570 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
CHCHD3-201ENST00000262570 MT1EP04732 61 aa6.14□□□□□ -1.43
CHCHD3-201ENST00000262570 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
CHCHD3-201ENST00000262570 KRTAP4-2Q9BYR5 136 aa6.09□□□□□ -1.43
CHCHD3-201ENST00000262570 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
CHCHD3-201ENST00000262570 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
CHCHD3-201ENST00000262570 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
CHCHD3-201ENST00000262570 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
CHCHD3-201ENST00000262570 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
CHCHD3-201ENST00000262570 SPRR2DP22532 72 aa5.95□□□□□ -1.46
CHCHD3-201ENST00000262570 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
CHCHD3-201ENST00000262570 MT1LQ93083 61 aa5.94□□□□□ -1.46
CHCHD3-201ENST00000262570 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
CHCHD3-201ENST00000262570 MT1GP13640 62 aa5.91□□□□□ -1.46
CHCHD3-201ENST00000262570 KRTAP20-1Q3LI63 56 aa5.88□□□□□ -1.47
CHCHD3-201ENST00000262570 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
CHCHD3-201ENST00000262570 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
CHCHD3-201ENST00000262570 MT1MQ8N339 61 aa5.81□□□□□ -1.48
CHCHD3-201ENST00000262570 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
CHCHD3-201ENST00000262570 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
CHCHD3-201ENST00000262570 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
CHCHD3-201ENST00000262570 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
CHCHD3-201ENST00000262570 KRTAP2-2Q9BYT5 123 aa5.7□□□□□ -1.5
CHCHD3-201ENST00000262570 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
CHCHD3-201ENST00000262570 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
CHCHD3-201ENST00000262570 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
CHCHD3-201ENST00000262570 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
CHCHD3-201ENST00000262570 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
CHCHD3-201ENST00000262570 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
CHCHD3-201ENST00000262570 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
CHCHD3-201ENST00000262570 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
CHCHD3-201ENST00000262570 MT4P47944 62 aa5.17□□□□□ -1.58
CHCHD3-201ENST00000262570 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
CHCHD3-201ENST00000262570 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
CHCHD3-201ENST00000262570 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
CHCHD3-201ENST00000262570 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
CHCHD3-201ENST00000262570 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
CHCHD3-201ENST00000262570 MT1AP04731 61 aa5.06□□□□□ -1.6
CHCHD3-201ENST00000262570 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
CHCHD3-201ENST00000262570 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
CHCHD3-201ENST00000262570 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
CHCHD3-201ENST00000262570 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
CHCHD3-201ENST00000262570 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
CHCHD3-201ENST00000262570 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
CHCHD3-201ENST00000262570 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
CHCHD3-201ENST00000262570 MT3P25713 68 aa4.61□□□□□ -1.67
CHCHD3-201ENST00000262570 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
CHCHD3-201ENST00000262570 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
CHCHD3-201ENST00000262570 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
CHCHD3-201ENST00000262570 INE1O15225 51 aa4.33□□□□□ -1.72
CHCHD3-201ENST00000262570 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
CHCHD3-201ENST00000262570 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
CHCHD3-201ENST00000262570 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CHCHD3-201ENST00000262570 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
CHCHD3-201ENST00000262570 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CHCHD3-201ENST00000262570 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
CHCHD3-201ENST00000262570 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
CHCHD3-201ENST00000262570 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
CHCHD3-201ENST00000262570 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
CHCHD3-201ENST00000262570 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
CHCHD3-201ENST00000262570 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
CHCHD3-201ENST00000262570 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
CHCHD3-201ENST00000262570 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.84
CHCHD3-201ENST00000262570 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CHCHD3-201ENST00000262570 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
CHCHD3-201ENST00000262570 PRM1P04553 51 aa3.23□□□□□ -1.89
CHCHD3-201ENST00000262570 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
CHCHD3-201ENST00000262570 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
CHCHD3-201ENST00000262570 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CHCHD3-201ENST00000262570 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 105 ms