RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
TRAF4-201ENST00000262395 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.47
TRAF4-201ENST00000262395 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
TRAF4-201ENST00000262395 MT1GP13640 62 aa5.88□□□□□ -1.47
TRAF4-201ENST00000262395 KRTAP9-2Q9BYQ4 174 aa5.86□□□□□ -1.47
TRAF4-201ENST00000262395 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
TRAF4-201ENST00000262395 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
TRAF4-201ENST00000262395 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
TRAF4-201ENST00000262395 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
TRAF4-201ENST00000262395 MT1MQ8N339 61 aa5.68□□□□□ -1.5
TRAF4-201ENST00000262395 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
TRAF4-201ENST00000262395 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
TRAF4-201ENST00000262395 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
TRAF4-201ENST00000262395 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
TRAF4-201ENST00000262395 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
TRAF4-201ENST00000262395 MACF1Q9UPN3 7388 aaKnown RBP5.46□□□□□ -1.54
TRAF4-201ENST00000262395 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
TRAF4-201ENST00000262395 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
TRAF4-201ENST00000262395 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
TRAF4-201ENST00000262395 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
TRAF4-201ENST00000262395 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
TRAF4-201ENST00000262395 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
TRAF4-201ENST00000262395 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
TRAF4-201ENST00000262395 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
TRAF4-201ENST00000262395 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
TRAF4-201ENST00000262395 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
TRAF4-201ENST00000262395 MT1AP04731 61 aa5.12□□□□□ -1.59
TRAF4-201ENST00000262395 PRM1P04553 51 aa5.07□□□□□ -1.6
TRAF4-201ENST00000262395 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
TRAF4-201ENST00000262395 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
TRAF4-201ENST00000262395 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
TRAF4-201ENST00000262395 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
TRAF4-201ENST00000262395 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
TRAF4-201ENST00000262395 SPRR2EP22531 72 aa4.85□□□□□ -1.63
TRAF4-201ENST00000262395 SPRR2BP35325 72 aa4.85□□□□□ -1.63
TRAF4-201ENST00000262395 SPRR2AP35326 72 aa4.85□□□□□ -1.63
TRAF4-201ENST00000262395 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
TRAF4-201ENST00000262395 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
TRAF4-201ENST00000262395 NEBP20929 6669 aa4.76□□□□□ -1.65
TRAF4-201ENST00000262395 SPRR2DP22532 72 aa4.65□□□□□ -1.67
TRAF4-201ENST00000262395 MT3P25713 68 aa4.56□□□□□ -1.68
TRAF4-201ENST00000262395 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
TRAF4-201ENST00000262395 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
TRAF4-201ENST00000262395 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
TRAF4-201ENST00000262395 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
TRAF4-201ENST00000262395 MT4P47944 62 aa4.2□□□□□ -1.74
TRAF4-201ENST00000262395 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
TRAF4-201ENST00000262395 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
TRAF4-201ENST00000262395 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
TRAF4-201ENST00000262395 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
TRAF4-201ENST00000262395 MUC5ACP98088 5654 aa4□□□□□ -1.77
TRAF4-201ENST00000262395 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
TRAF4-201ENST00000262395 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
TRAF4-201ENST00000262395 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
TRAF4-201ENST00000262395 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
TRAF4-201ENST00000262395 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
TRAF4-201ENST00000262395 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
TRAF4-201ENST00000262395 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
TRAF4-201ENST00000262395 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
TRAF4-201ENST00000262395 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
TRAF4-201ENST00000262395 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
TRAF4-201ENST00000262395 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
TRAF4-201ENST00000262395 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
TRAF4-201ENST00000262395 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
TRAF4-201ENST00000262395 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
TRAF4-201ENST00000262395 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
TRAF4-201ENST00000262395 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
TRAF4-201ENST00000262395 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.9
TRAF4-201ENST00000262395 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
TRAF4-201ENST00000262395 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
TRAF4-201ENST00000262395 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
TRAF4-201ENST00000262395 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
TRAF4-201ENST00000262395 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
TRAF4-201ENST00000262395 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
TRAF4-201ENST00000262395 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
TRAF4-201ENST00000262395 PHGR1C9JFL3 82 aa2.53□□□□□ -2
TRAF4-201ENST00000262395 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 84.2 ms