RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
TRAM1-201ENST00000262213 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
TRAM1-201ENST00000262213 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
TRAM1-201ENST00000262213 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
TRAM1-201ENST00000262213 MT1GP13640 62 aa5.69□□□□□ -1.5
TRAM1-201ENST00000262213 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
TRAM1-201ENST00000262213 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
TRAM1-201ENST00000262213 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
TRAM1-201ENST00000262213 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
TRAM1-201ENST00000262213 MT1MQ8N339 61 aa5.52□□□□□ -1.53
TRAM1-201ENST00000262213 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
TRAM1-201ENST00000262213 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
TRAM1-201ENST00000262213 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
TRAM1-201ENST00000262213 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
TRAM1-201ENST00000262213 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
TRAM1-201ENST00000262213 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
TRAM1-201ENST00000262213 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
TRAM1-201ENST00000262213 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
TRAM1-201ENST00000262213 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.58
TRAM1-201ENST00000262213 KRTAP5-9P26371 169 aa5.18□□□□□ -1.58
TRAM1-201ENST00000262213 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
TRAM1-201ENST00000262213 KRTAP6-1Q3LI64 71 aa5.11□□□□□ -1.59
TRAM1-201ENST00000262213 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
TRAM1-201ENST00000262213 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
TRAM1-201ENST00000262213 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
TRAM1-201ENST00000262213 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
TRAM1-201ENST00000262213 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
TRAM1-201ENST00000262213 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
TRAM1-201ENST00000262213 MT1AP04731 61 aa5□□□□□ -1.61
TRAM1-201ENST00000262213 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
TRAM1-201ENST00000262213 SPRR2EP22531 72 aa4.96□□□□□ -1.62
TRAM1-201ENST00000262213 SPRR2BP35325 72 aa4.96□□□□□ -1.62
TRAM1-201ENST00000262213 SPRR2AP35326 72 aa4.96□□□□□ -1.62
TRAM1-201ENST00000262213 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
TRAM1-201ENST00000262213 LCE3EQ5T5B0 92 aa4.95□□□□□ -1.62
TRAM1-201ENST00000262213 PRM1P04553 51 aa4.9□□□□□ -1.63
TRAM1-201ENST00000262213 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
TRAM1-201ENST00000262213 SPRR2DP22532 72 aa4.77□□□□□ -1.65
TRAM1-201ENST00000262213 NEBP20929 6669 aa4.69□□□□□ -1.66
TRAM1-201ENST00000262213 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
TRAM1-201ENST00000262213 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
TRAM1-201ENST00000262213 MT3P25713 68 aa4.45□□□□□ -1.7
TRAM1-201ENST00000262213 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
TRAM1-201ENST00000262213 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
TRAM1-201ENST00000262213 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
TRAM1-201ENST00000262213 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
TRAM1-201ENST00000262213 MT4P47944 62 aa4.15□□□□□ -1.75
TRAM1-201ENST00000262213 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
TRAM1-201ENST00000262213 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
TRAM1-201ENST00000262213 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
TRAM1-201ENST00000262213 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
TRAM1-201ENST00000262213 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
TRAM1-201ENST00000262213 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
TRAM1-201ENST00000262213 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
TRAM1-201ENST00000262213 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
TRAM1-201ENST00000262213 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
TRAM1-201ENST00000262213 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
TRAM1-201ENST00000262213 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
TRAM1-201ENST00000262213 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
TRAM1-201ENST00000262213 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
TRAM1-201ENST00000262213 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
TRAM1-201ENST00000262213 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
TRAM1-201ENST00000262213 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
TRAM1-201ENST00000262213 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
TRAM1-201ENST00000262213 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
TRAM1-201ENST00000262213 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
TRAM1-201ENST00000262213 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
TRAM1-201ENST00000262213 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
TRAM1-201ENST00000262213 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
TRAM1-201ENST00000262213 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
TRAM1-201ENST00000262213 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
TRAM1-201ENST00000262213 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
TRAM1-201ENST00000262213 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
TRAM1-201ENST00000262213 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
TRAM1-201ENST00000262213 LCE1FQ5T754 118 aa2.57□□□□□ -2
TRAM1-201ENST00000262213 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
TRAM1-201ENST00000262213 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 109 ms