RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
VSX2-201ENST00000261980 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
VSX2-201ENST00000261980 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
VSX2-201ENST00000261980 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
VSX2-201ENST00000261980 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
VSX2-201ENST00000261980 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
VSX2-201ENST00000261980 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
VSX2-201ENST00000261980 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
VSX2-201ENST00000261980 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
VSX2-201ENST00000261980 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
VSX2-201ENST00000261980 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
VSX2-201ENST00000261980 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
VSX2-201ENST00000261980 MT1LQ93083 61 aa5.42□□□□□ -1.54
VSX2-201ENST00000261980 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
VSX2-201ENST00000261980 MT1GP13640 62 aa5.38□□□□□ -1.55
VSX2-201ENST00000261980 MT1EP04732 61 aa5.32□□□□□ -1.56
VSX2-201ENST00000261980 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
VSX2-201ENST00000261980 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
VSX2-201ENST00000261980 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
VSX2-201ENST00000261980 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
VSX2-201ENST00000261980 PRM1P04553 51 aa4.96□□□□□ -1.62
VSX2-201ENST00000261980 MT1MQ8N339 61 aa4.96□□□□□ -1.62
VSX2-201ENST00000261980 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
VSX2-201ENST00000261980 SPRR2EP22531 72 aa4.94□□□□□ -1.62
VSX2-201ENST00000261980 SPRR2BP35325 72 aa4.94□□□□□ -1.62
VSX2-201ENST00000261980 SPRR2AP35326 72 aa4.94□□□□□ -1.62
VSX2-201ENST00000261980 NEBP20929 6669 aa4.94□□□□□ -1.62
VSX2-201ENST00000261980 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
VSX2-201ENST00000261980 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
VSX2-201ENST00000261980 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
VSX2-201ENST00000261980 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
VSX2-201ENST00000261980 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
VSX2-201ENST00000261980 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
VSX2-201ENST00000261980 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
VSX2-201ENST00000261980 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
VSX2-201ENST00000261980 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
VSX2-201ENST00000261980 SPRR2DP22532 72 aa4.73□□□□□ -1.65
VSX2-201ENST00000261980 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
VSX2-201ENST00000261980 MT1AP04731 61 aa4.57□□□□□ -1.68
VSX2-201ENST00000261980 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
VSX2-201ENST00000261980 MT4P47944 62 aa4.34□□□□□ -1.72
VSX2-201ENST00000261980 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
VSX2-201ENST00000261980 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
VSX2-201ENST00000261980 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
VSX2-201ENST00000261980 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
VSX2-201ENST00000261980 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
VSX2-201ENST00000261980 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
VSX2-201ENST00000261980 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
VSX2-201ENST00000261980 MT3P25713 68 aa3.98□□□□□ -1.77
VSX2-201ENST00000261980 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
VSX2-201ENST00000261980 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
VSX2-201ENST00000261980 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
VSX2-201ENST00000261980 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
VSX2-201ENST00000261980 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
VSX2-201ENST00000261980 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
VSX2-201ENST00000261980 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
VSX2-201ENST00000261980 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
VSX2-201ENST00000261980 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
VSX2-201ENST00000261980 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
VSX2-201ENST00000261980 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
VSX2-201ENST00000261980 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
VSX2-201ENST00000261980 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
VSX2-201ENST00000261980 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
VSX2-201ENST00000261980 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
VSX2-201ENST00000261980 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
VSX2-201ENST00000261980 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
VSX2-201ENST00000261980 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
VSX2-201ENST00000261980 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
VSX2-201ENST00000261980 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
VSX2-201ENST00000261980 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
VSX2-201ENST00000261980 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
VSX2-201ENST00000261980 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
VSX2-201ENST00000261980 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
VSX2-201ENST00000261980 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
VSX2-201ENST00000261980 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.98
VSX2-201ENST00000261980 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
VSX2-201ENST00000261980 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 120.5 ms