RNA–Protein interactions for RNA: ENST00000261908.10

NEO1-201, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEO1, Length 7,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-201ENST00000261908 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
NEO1-201ENST00000261908 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
NEO1-201ENST00000261908 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
NEO1-201ENST00000261908 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
NEO1-201ENST00000261908 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
NEO1-201ENST00000261908 HERC2O95714 4834 aa4.68□□□□□ -1.66
NEO1-201ENST00000261908 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
NEO1-201ENST00000261908 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
NEO1-201ENST00000261908 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
NEO1-201ENST00000261908 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
NEO1-201ENST00000261908 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
NEO1-201ENST00000261908 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
NEO1-201ENST00000261908 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
NEO1-201ENST00000261908 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
NEO1-201ENST00000261908 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
NEO1-201ENST00000261908 RYR2Q92736 4967 aa4.54□□□□□ -1.68
NEO1-201ENST00000261908 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
NEO1-201ENST00000261908 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
NEO1-201ENST00000261908 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
NEO1-201ENST00000261908 MT1AP04731 61 aa4.51□□□□□ -1.69
NEO1-201ENST00000261908 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
NEO1-201ENST00000261908 HERC1Q15751 4861 aa4.41□□□□□ -1.7
NEO1-201ENST00000261908 PCLOQ9Y6V0 5065 aa4.4□□□□□ -1.7
NEO1-201ENST00000261908 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
NEO1-201ENST00000261908 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
NEO1-201ENST00000261908 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
NEO1-201ENST00000261908 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
NEO1-201ENST00000261908 EPPK1P58107 5090 aaKnown RBP4.29□□□□□ -1.72
NEO1-201ENST00000261908 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
NEO1-201ENST00000261908 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
NEO1-201ENST00000261908 MUC2Q02817 5179 aa4.24□□□□□ -1.73
NEO1-201ENST00000261908 KMT2DO14686 5537 aa4.14□□□□□ -1.75
NEO1-201ENST00000261908 FAT4Q6V0I7 4981 aa4.09□□□□□ -1.75
NEO1-201ENST00000261908 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
NEO1-201ENST00000261908 LCE4AQ5TA78 99 aa4.09□□□□□ -1.76
NEO1-201ENST00000261908 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
NEO1-201ENST00000261908 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
NEO1-201ENST00000261908 ABCA13Q86UQ4 5058 aa4□□□□□ -1.77
NEO1-201ENST00000261908 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
NEO1-201ENST00000261908 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
NEO1-201ENST00000261908 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
NEO1-201ENST00000261908 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
NEO1-201ENST00000261908 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
NEO1-201ENST00000261908 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
NEO1-201ENST00000261908 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
NEO1-201ENST00000261908 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
NEO1-201ENST00000261908 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
NEO1-201ENST00000261908 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
NEO1-201ENST00000261908 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
NEO1-201ENST00000261908 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
NEO1-201ENST00000261908 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
NEO1-201ENST00000261908 USH2AO75445 5202 aa3.4□□□□□ -1.87
NEO1-201ENST00000261908 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
NEO1-201ENST00000261908 NEBP20929 6669 aa3.28□□□□□ -1.88
NEO1-201ENST00000261908 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
NEO1-201ENST00000261908 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
NEO1-201ENST00000261908 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
NEO1-201ENST00000261908 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
NEO1-201ENST00000261908 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
NEO1-201ENST00000261908 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
NEO1-201ENST00000261908 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
NEO1-201ENST00000261908 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
NEO1-201ENST00000261908 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
NEO1-201ENST00000261908 MUC5ACP98088 5654 aa2.58□□□□□ -2
NEO1-201ENST00000261908 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
NEO1-201ENST00000261908 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
NEO1-201ENST00000261908 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
NEO1-201ENST00000261908 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
NEO1-201ENST00000261908 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
NEO1-201ENST00000261908 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
NEO1-201ENST00000261908 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
NEO1-201ENST00000261908 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
NEO1-201ENST00000261908 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
NEO1-201ENST00000261908 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
NEO1-201ENST00000261908 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
NEO1-201ENST00000261908 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
NEO1-201ENST00000261908 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms