RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
TM9SF1-201ENST00000261789 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
TM9SF1-201ENST00000261789 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
TM9SF1-201ENST00000261789 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
TM9SF1-201ENST00000261789 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
TM9SF1-201ENST00000261789 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
TM9SF1-201ENST00000261789 MT1GP13640 62 aa5.35□□□□□ -1.55
TM9SF1-201ENST00000261789 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
TM9SF1-201ENST00000261789 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
TM9SF1-201ENST00000261789 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
TM9SF1-201ENST00000261789 MT1MQ8N339 61 aa5.28□□□□□ -1.56
TM9SF1-201ENST00000261789 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
TM9SF1-201ENST00000261789 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
TM9SF1-201ENST00000261789 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
TM9SF1-201ENST00000261789 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
TM9SF1-201ENST00000261789 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
TM9SF1-201ENST00000261789 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
TM9SF1-201ENST00000261789 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
TM9SF1-201ENST00000261789 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
TM9SF1-201ENST00000261789 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
TM9SF1-201ENST00000261789 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
TM9SF1-201ENST00000261789 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
TM9SF1-201ENST00000261789 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.9□□□□□ -1.62
TM9SF1-201ENST00000261789 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
TM9SF1-201ENST00000261789 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
TM9SF1-201ENST00000261789 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
TM9SF1-201ENST00000261789 SPRR2EP22531 72 aa4.8□□□□□ -1.64
TM9SF1-201ENST00000261789 SPRR2BP35325 72 aa4.8□□□□□ -1.64
TM9SF1-201ENST00000261789 SPRR2AP35326 72 aa4.8□□□□□ -1.64
TM9SF1-201ENST00000261789 MT1AP04731 61 aa4.7□□□□□ -1.66
TM9SF1-201ENST00000261789 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
TM9SF1-201ENST00000261789 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
TM9SF1-201ENST00000261789 SPRR2DP22532 72 aa4.61□□□□□ -1.67
TM9SF1-201ENST00000261789 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
TM9SF1-201ENST00000261789 NEBP20929 6669 aa4.57□□□□□ -1.68
TM9SF1-201ENST00000261789 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
TM9SF1-201ENST00000261789 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
TM9SF1-201ENST00000261789 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
TM9SF1-201ENST00000261789 PRM1P04553 51 aa4.4□□□□□ -1.7
TM9SF1-201ENST00000261789 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
TM9SF1-201ENST00000261789 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
TM9SF1-201ENST00000261789 MT3P25713 68 aa4.22□□□□□ -1.73
TM9SF1-201ENST00000261789 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
TM9SF1-201ENST00000261789 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
TM9SF1-201ENST00000261789 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
TM9SF1-201ENST00000261789 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
TM9SF1-201ENST00000261789 MT4P47944 62 aa4.02□□□□□ -1.77
TM9SF1-201ENST00000261789 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
TM9SF1-201ENST00000261789 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
TM9SF1-201ENST00000261789 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
TM9SF1-201ENST00000261789 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
TM9SF1-201ENST00000261789 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
TM9SF1-201ENST00000261789 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
TM9SF1-201ENST00000261789 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
TM9SF1-201ENST00000261789 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
TM9SF1-201ENST00000261789 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
TM9SF1-201ENST00000261789 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
TM9SF1-201ENST00000261789 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
TM9SF1-201ENST00000261789 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
TM9SF1-201ENST00000261789 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
TM9SF1-201ENST00000261789 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
TM9SF1-201ENST00000261789 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
TM9SF1-201ENST00000261789 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
TM9SF1-201ENST00000261789 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
TM9SF1-201ENST00000261789 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
TM9SF1-201ENST00000261789 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
TM9SF1-201ENST00000261789 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
TM9SF1-201ENST00000261789 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
TM9SF1-201ENST00000261789 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
TM9SF1-201ENST00000261789 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
TM9SF1-201ENST00000261789 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
TM9SF1-201ENST00000261789 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.96
TM9SF1-201ENST00000261789 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
TM9SF1-201ENST00000261789 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.97
TM9SF1-201ENST00000261789 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
TM9SF1-201ENST00000261789 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
TM9SF1-201ENST00000261789 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms