RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
C12orf49-201ENST00000261318 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
C12orf49-201ENST00000261318 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
C12orf49-201ENST00000261318 PCLOQ9Y6V0 5065 aa4.3□□□□□ -1.72
C12orf49-201ENST00000261318 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
C12orf49-201ENST00000261318 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
C12orf49-201ENST00000261318 MT1AP04731 61 aa4.25□□□□□ -1.73
C12orf49-201ENST00000261318 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
C12orf49-201ENST00000261318 HERC1Q15751 4861 aa4.2□□□□□ -1.74
C12orf49-201ENST00000261318 HMCN2Q8NDA2 5059 aa4.13□□□□□ -1.75
C12orf49-201ENST00000261318 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.76
C12orf49-201ENST00000261318 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.76
C12orf49-201ENST00000261318 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
C12orf49-201ENST00000261318 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
C12orf49-201ENST00000261318 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
C12orf49-201ENST00000261318 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
C12orf49-201ENST00000261318 BIRC6Q9NR09 4857 aa4□□□□□ -1.77
C12orf49-201ENST00000261318 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
C12orf49-201ENST00000261318 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
C12orf49-201ENST00000261318 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
C12orf49-201ENST00000261318 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
C12orf49-201ENST00000261318 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
C12orf49-201ENST00000261318 EPPK1P58107 5090 aaKnown RBP3.85□□□□□ -1.79
C12orf49-201ENST00000261318 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
C12orf49-201ENST00000261318 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
C12orf49-201ENST00000261318 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
C12orf49-201ENST00000261318 RNF213Q63HN8 5207 aa3.76□□□□□ -1.81
C12orf49-201ENST00000261318 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
C12orf49-201ENST00000261318 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
C12orf49-201ENST00000261318 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
C12orf49-201ENST00000261318 MUC2Q02817 5179 aa3.71□□□□□ -1.82
C12orf49-201ENST00000261318 ABCA13Q86UQ4 5058 aa3.7□□□□□ -1.82
C12orf49-201ENST00000261318 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
C12orf49-201ENST00000261318 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
C12orf49-201ENST00000261318 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
C12orf49-201ENST00000261318 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
C12orf49-201ENST00000261318 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
C12orf49-201ENST00000261318 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
C12orf49-201ENST00000261318 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
C12orf49-201ENST00000261318 KMT2DO14686 5537 aa3.45□□□□□ -1.86
C12orf49-201ENST00000261318 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
C12orf49-201ENST00000261318 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
C12orf49-201ENST00000261318 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
C12orf49-201ENST00000261318 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
C12orf49-201ENST00000261318 USH2AO75445 5202 aa3.21□□□□□ -1.9
C12orf49-201ENST00000261318 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
C12orf49-201ENST00000261318 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
C12orf49-201ENST00000261318 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
C12orf49-201ENST00000261318 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
C12orf49-201ENST00000261318 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
C12orf49-201ENST00000261318 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
C12orf49-201ENST00000261318 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
C12orf49-201ENST00000261318 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
C12orf49-201ENST00000261318 NEBP20929 6669 aa2.91□□□□□ -1.94
C12orf49-201ENST00000261318 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
C12orf49-201ENST00000261318 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
C12orf49-201ENST00000261318 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
C12orf49-201ENST00000261318 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
C12orf49-201ENST00000261318 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
C12orf49-201ENST00000261318 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
C12orf49-201ENST00000261318 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
C12orf49-201ENST00000261318 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
C12orf49-201ENST00000261318 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
C12orf49-201ENST00000261318 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
C12orf49-201ENST00000261318 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
C12orf49-201ENST00000261318 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
C12orf49-201ENST00000261318 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
C12orf49-201ENST00000261318 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
C12orf49-201ENST00000261318 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
C12orf49-201ENST00000261318 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
C12orf49-201ENST00000261318 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
C12orf49-201ENST00000261318 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.09
C12orf49-201ENST00000261318 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
C12orf49-201ENST00000261318 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
C12orf49-201ENST00000261318 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
C12orf49-201ENST00000261318 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
C12orf49-201ENST00000261318 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 77.7 ms