RNA–Protein interactions for RNA: ENST00000261303.12

PSMC1-201, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC1, Length 4,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-201ENST00000261303 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
PSMC1-201ENST00000261303 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
PSMC1-201ENST00000261303 SPRR2DP22532 72 aa4.61□□□□□ -1.67
PSMC1-201ENST00000261303 MUC2Q02817 5179 aa4.59□□□□□ -1.68
PSMC1-201ENST00000261303 MT1MQ8N339 61 aa4.51□□□□□ -1.69
PSMC1-201ENST00000261303 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
PSMC1-201ENST00000261303 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
PSMC1-201ENST00000261303 MT3P25713 68 aa4.46□□□□□ -1.69
PSMC1-201ENST00000261303 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
PSMC1-201ENST00000261303 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
PSMC1-201ENST00000261303 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
PSMC1-201ENST00000261303 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
PSMC1-201ENST00000261303 LOC100996750A0A140TA64 210 aa4.36□□□□□ -1.71
PSMC1-201ENST00000261303 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
PSMC1-201ENST00000261303 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
PSMC1-201ENST00000261303 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
PSMC1-201ENST00000261303 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
PSMC1-201ENST00000261303 MT1AP04731 61 aa4.16□□□□□ -1.74
PSMC1-201ENST00000261303 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
PSMC1-201ENST00000261303 USH2AO75445 5202 aa4.1□□□□□ -1.75
PSMC1-201ENST00000261303 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
PSMC1-201ENST00000261303 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
PSMC1-201ENST00000261303 MT4P47944 62 aa4.09□□□□□ -1.76
PSMC1-201ENST00000261303 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
PSMC1-201ENST00000261303 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
PSMC1-201ENST00000261303 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
PSMC1-201ENST00000261303 PRM1P04553 51 aa4.02□□□□□ -1.77
PSMC1-201ENST00000261303 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
PSMC1-201ENST00000261303 KMT2DO14686 5537 aa3.97□□□□□ -1.77
PSMC1-201ENST00000261303 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
PSMC1-201ENST00000261303 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
PSMC1-201ENST00000261303 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
PSMC1-201ENST00000261303 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
PSMC1-201ENST00000261303 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
PSMC1-201ENST00000261303 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
PSMC1-201ENST00000261303 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.79
PSMC1-201ENST00000261303 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
PSMC1-201ENST00000261303 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
PSMC1-201ENST00000261303 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
PSMC1-201ENST00000261303 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
PSMC1-201ENST00000261303 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
PSMC1-201ENST00000261303 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
PSMC1-201ENST00000261303 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
PSMC1-201ENST00000261303 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
PSMC1-201ENST00000261303 MDN1Q9NU22 5596 aa3.59□□□□□ -1.83
PSMC1-201ENST00000261303 NEBP20929 6669 aa3.35□□□□□ -1.87
PSMC1-201ENST00000261303 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
PSMC1-201ENST00000261303 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
PSMC1-201ENST00000261303 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
PSMC1-201ENST00000261303 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PSMC1-201ENST00000261303 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
PSMC1-201ENST00000261303 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
PSMC1-201ENST00000261303 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
PSMC1-201ENST00000261303 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
PSMC1-201ENST00000261303 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
PSMC1-201ENST00000261303 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
PSMC1-201ENST00000261303 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
PSMC1-201ENST00000261303 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
PSMC1-201ENST00000261303 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
PSMC1-201ENST00000261303 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
PSMC1-201ENST00000261303 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
PSMC1-201ENST00000261303 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
PSMC1-201ENST00000261303 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.98
PSMC1-201ENST00000261303 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
PSMC1-201ENST00000261303 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PSMC1-201ENST00000261303 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
PSMC1-201ENST00000261303 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
PSMC1-201ENST00000261303 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PSMC1-201ENST00000261303 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
PSMC1-201ENST00000261303 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
PSMC1-201ENST00000261303 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
PSMC1-201ENST00000261303 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
PSMC1-201ENST00000261303 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.08
PSMC1-201ENST00000261303 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
PSMC1-201ENST00000261303 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
PSMC1-201ENST00000261303 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
PSMC1-201ENST00000261303 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 65.7 ms