RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.88
SORL1-201ENST00000260197 MT1AP04731 61 aa3.33□□□□□ -1.88
SORL1-201ENST00000260197 KMT2CQ8NEZ4 4911 aaKnown RBP3.33□□□□□ -1.88
SORL1-201ENST00000260197 KRTAP9-2Q9BYQ4 174 aa3.3□□□□□ -1.88
SORL1-201ENST00000260197 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
SORL1-201ENST00000260197 BIRC6Q9NR09 4857 aa3.26□□□□□ -1.89
SORL1-201ENST00000260197 HERC2O95714 4834 aa3.22□□□□□ -1.89
SORL1-201ENST00000260197 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
SORL1-201ENST00000260197 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
SORL1-201ENST00000260197 HYDINQ4G0P3 5121 aa3.15□□□□□ -1.91
SORL1-201ENST00000260197 HERC1Q15751 4861 aa3.14□□□□□ -1.91
SORL1-201ENST00000260197 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
SORL1-201ENST00000260197 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
SORL1-201ENST00000260197 LCE2AQ5TA79 106 aaPredicted RBP3.09□□□□□ -1.91
SORL1-201ENST00000260197 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
SORL1-201ENST00000260197 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.92
SORL1-201ENST00000260197 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.92
SORL1-201ENST00000260197 KRTAP9-6A0A140TA67 174 aa3.06□□□□□ -1.92
SORL1-201ENST00000260197 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
SORL1-201ENST00000260197 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
SORL1-201ENST00000260197 LCE4AQ5TA78 99 aa3□□□□□ -1.93
SORL1-201ENST00000260197 SYNE2Q8WXH0 6885 aaKnown RBP2.98□□□□□ -1.93
SORL1-201ENST00000260197 KRTAP9-7A8MTY7 169 aa2.96□□□□□ -1.94
SORL1-201ENST00000260197 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
SORL1-201ENST00000260197 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
SORL1-201ENST00000260197 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SORL1-201ENST00000260197 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
SORL1-201ENST00000260197 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
SORL1-201ENST00000260197 EPPK1P58107 5090 aaKnown RBP2.85□□□□□ -1.95
SORL1-201ENST00000260197 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.84□□□□□ -1.96
SORL1-201ENST00000260197 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
SORL1-201ENST00000260197 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
SORL1-201ENST00000260197 HMCN2Q8NDA2 5059 aa2.77□□□□□ -1.97
SORL1-201ENST00000260197 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.97
SORL1-201ENST00000260197 FAT4Q6V0I7 4981 aa2.67□□□□□ -1.98
SORL1-201ENST00000260197 MUC2Q02817 5179 aa2.65□□□□□ -1.99
SORL1-201ENST00000260197 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
SORL1-201ENST00000260197 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
SORL1-201ENST00000260197 KRTAP5-9P26371 169 aa2.55□□□□□ -2
SORL1-201ENST00000260197 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
SORL1-201ENST00000260197 KMT2DO14686 5537 aa2.48□□□□□ -2.01
SORL1-201ENST00000260197 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
SORL1-201ENST00000260197 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.02
SORL1-201ENST00000260197 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
SORL1-201ENST00000260197 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
SORL1-201ENST00000260197 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
SORL1-201ENST00000260197 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SORL1-201ENST00000260197 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
SORL1-201ENST00000260197 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
SORL1-201ENST00000260197 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
SORL1-201ENST00000260197 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
SORL1-201ENST00000260197 USH2AO75445 5202 aa2.18□□□□□ -2.06
SORL1-201ENST00000260197 NEBP20929 6669 aa2.18□□□□□ -2.06
SORL1-201ENST00000260197 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
SORL1-201ENST00000260197 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
SORL1-201ENST00000260197 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
SORL1-201ENST00000260197 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
SORL1-201ENST00000260197 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
SORL1-201ENST00000260197 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
SORL1-201ENST00000260197 DSTQ03001 7570 aaKnown RBP1.8□□□□□ -2.12
SORL1-201ENST00000260197 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
SORL1-201ENST00000260197 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
SORL1-201ENST00000260197 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
SORL1-201ENST00000260197 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
SORL1-201ENST00000260197 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
SORL1-201ENST00000260197 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
SORL1-201ENST00000260197 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
SORL1-201ENST00000260197 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
SORL1-201ENST00000260197 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
SORL1-201ENST00000260197 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SORL1-201ENST00000260197 MACF1Q9UPN3 7388 aaKnown RBP1.57□□□□□ -2.16
SORL1-201ENST00000260197 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
SORL1-201ENST00000260197 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
SORL1-201ENST00000260197 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
SORL1-201ENST00000260197 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
SORL1-201ENST00000260197 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
SORL1-201ENST00000260197 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 37.9 ms