RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 MT1LQ93083 61 aa8.44□□□□□ -1.06
LMO2-201ENST00000257818 KRTAP19-4Q3LI73 84 aa8.38□□□□□ -1.07
LMO2-201ENST00000257818 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
LMO2-201ENST00000257818 MUC12Q9UKN1 5478 aa8.2□□□□□ -1.1
LMO2-201ENST00000257818 MACF1Q9UPN3 7388 aaKnown RBP8.14□□□□□ -1.11
LMO2-201ENST00000257818 CRCT1Q9UGL9 99 aa8.09□□□□□ -1.11
LMO2-201ENST00000257818 SPRR2FQ96RM1 72 aa8.06□□□□□ -1.12
LMO2-201ENST00000257818 KRTAP19-3Q7Z4W3 81 aa8.05□□□□□ -1.12
LMO2-201ENST00000257818 LOC100996750A0A140TA64 210 aa8.04□□□□□ -1.12
LMO2-201ENST00000257818 KRTAP4-3Q9BYR4 195 aa8.01□□□□□ -1.13
LMO2-201ENST00000257818 MT1GP13640 62 aa7.97□□□□□ -1.13
LMO2-201ENST00000257818 MT1MQ8N339 61 aa7.96□□□□□ -1.14
LMO2-201ENST00000257818 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
LMO2-201ENST00000257818 LCE5AQ5TCM9 118 aa7.85□□□□□ -1.15
LMO2-201ENST00000257818 KRTAP5-9P26371 169 aa7.71□□□□□ -1.18
LMO2-201ENST00000257818 MDN1Q9NU22 5596 aa7.7□□□□□ -1.18
LMO2-201ENST00000257818 DSTQ03001 7570 aaKnown RBP7.67□□□□□ -1.18
LMO2-201ENST00000257818 KRTAP12-4P60329 112 aa7.62□□□□□ -1.19
LMO2-201ENST00000257818 LCE1AQ5T7P2 110 aa7.61□□□□□ -1.19
LMO2-201ENST00000257818 SPRR2EP22531 72 aa7.5□□□□□ -1.21
LMO2-201ENST00000257818 SPRR2BP35325 72 aa7.5□□□□□ -1.21
LMO2-201ENST00000257818 SPRR2AP35326 72 aa7.5□□□□□ -1.21
LMO2-201ENST00000257818 KRTAP9-6A0A140TA67 174 aa7.49□□□□□ -1.21
LMO2-201ENST00000257818 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
LMO2-201ENST00000257818 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
LMO2-201ENST00000257818 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
LMO2-201ENST00000257818 KRTAP4-9Q9BYQ8 210 aa7.31□□□□□ -1.24
LMO2-201ENST00000257818 SPRR2DP22532 72 aa7.2□□□□□ -1.26
LMO2-201ENST00000257818 MT1AP04731 61 aa7.2□□□□□ -1.26
LMO2-201ENST00000257818 KRTAP6-1Q3LI64 71 aa7.18□□□□□ -1.26
LMO2-201ENST00000257818 KRTAP5-5Q701N2 237 aaPredicted RBP7.11□□□□□ -1.27
LMO2-201ENST00000257818 SYNE1Q8NF91 8797 aaKnown RBP7.1□□□□□ -1.27
LMO2-201ENST00000257818 LCE3DQ9BYE3 92 aa7.01□□□□□ -1.29
LMO2-201ENST00000257818 LCE3EQ5T5B0 92 aa6.94□□□□□ -1.3
LMO2-201ENST00000257818 KRTAP9-7A8MTY7 169 aa6.92□□□□□ -1.3
LMO2-201ENST00000257818 NEBP20929 6669 aa6.83□□□□□ -1.32
LMO2-201ENST00000257818 PRM1P04553 51 aa6.79□□□□□ -1.32
LMO2-201ENST00000257818 KRTAP9-4Q9BYQ2 154 aa6.7□□□□□ -1.34
LMO2-201ENST00000257818 KRTAP6-2Q3LI66 62 aa6.53□□□□□ -1.36
LMO2-201ENST00000257818 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
LMO2-201ENST00000257818 MT3P25713 68 aa6.37□□□□□ -1.39
LMO2-201ENST00000257818 MT4P47944 62 aa6.34□□□□□ -1.39
LMO2-201ENST00000257818 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
LMO2-201ENST00000257818 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
LMO2-201ENST00000257818 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
LMO2-201ENST00000257818 OBSCNQ5VST9 7968 aa6.23□□□□□ -1.41
LMO2-201ENST00000257818 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
LMO2-201ENST00000257818 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
LMO2-201ENST00000257818 LCE1DQ5T752 114 aa6.09□□□□□ -1.44
LMO2-201ENST00000257818 HMCN1Q96RW7 5635 aa6.08□□□□□ -1.44
LMO2-201ENST00000257818 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
LMO2-201ENST00000257818 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
LMO2-201ENST00000257818 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
LMO2-201ENST00000257818 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
LMO2-201ENST00000257818 LCE1BQ5T7P3 118 aa5.23□□□□□ -1.57
LMO2-201ENST00000257818 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
LMO2-201ENST00000257818 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
LMO2-201ENST00000257818 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
LMO2-201ENST00000257818 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
LMO2-201ENST00000257818 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
LMO2-201ENST00000257818 LCE1CQ5T751 118 aa5.04□□□□□ -1.6
LMO2-201ENST00000257818 KRTAP5-8O75690 187 aa5.02□□□□□ -1.61
LMO2-201ENST00000257818 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
LMO2-201ENST00000257818 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.65
LMO2-201ENST00000257818 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
LMO2-201ENST00000257818 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
LMO2-201ENST00000257818 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.7
LMO2-201ENST00000257818 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
LMO2-201ENST00000257818 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
LMO2-201ENST00000257818 KRTAP21-1Q3LI58 79 aa4.3□□□□□ -1.72
LMO2-201ENST00000257818 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
LMO2-201ENST00000257818 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
LMO2-201ENST00000257818 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
LMO2-201ENST00000257818 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
LMO2-201ENST00000257818 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
LMO2-201ENST00000257818 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
LMO2-201ENST00000257818 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 204.3 ms