RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 HERC2O95714 4834 aa5.31□□□□□ -1.56
SORT1-201ENST00000256637 MT1MQ8N339 61 aa5.29□□□□□ -1.56
SORT1-201ENST00000256637 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
SORT1-201ENST00000256637 KMT2CQ8NEZ4 4911 aaKnown RBP5.25□□□□□ -1.57
SORT1-201ENST00000256637 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
SORT1-201ENST00000256637 BIRC6Q9NR09 4857 aa5.2□□□□□ -1.58
SORT1-201ENST00000256637 MT3P25713 68 aa5.18□□□□□ -1.58
SORT1-201ENST00000256637 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
SORT1-201ENST00000256637 LCE1CQ5T751 118 aa5.13□□□□□ -1.59
SORT1-201ENST00000256637 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
SORT1-201ENST00000256637 LCE1FQ5T754 118 aa5.13□□□□□ -1.59
SORT1-201ENST00000256637 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
SORT1-201ENST00000256637 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
SORT1-201ENST00000256637 PRM1P04553 51 aa5.09□□□□□ -1.59
SORT1-201ENST00000256637 HERC1Q15751 4861 aa5.08□□□□□ -1.6
SORT1-201ENST00000256637 LCE2AQ5TA79 106 aaPredicted RBP5.06□□□□□ -1.6
SORT1-201ENST00000256637 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
SORT1-201ENST00000256637 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
SORT1-201ENST00000256637 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
SORT1-201ENST00000256637 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
SORT1-201ENST00000256637 EPPK1P58107 5090 aaKnown RBP4.91□□□□□ -1.62
SORT1-201ENST00000256637 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
SORT1-201ENST00000256637 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
SORT1-201ENST00000256637 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
SORT1-201ENST00000256637 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
SORT1-201ENST00000256637 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
SORT1-201ENST00000256637 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
SORT1-201ENST00000256637 MT1AP04731 61 aa4.71□□□□□ -1.66
SORT1-201ENST00000256637 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
SORT1-201ENST00000256637 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
SORT1-201ENST00000256637 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
SORT1-201ENST00000256637 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
SORT1-201ENST00000256637 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
SORT1-201ENST00000256637 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
SORT1-201ENST00000256637 MUC2Q02817 5179 aa4.43□□□□□ -1.7
SORT1-201ENST00000256637 ABCA13Q86UQ4 5058 aa4.4□□□□□ -1.71
SORT1-201ENST00000256637 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
SORT1-201ENST00000256637 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
SORT1-201ENST00000256637 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
SORT1-201ENST00000256637 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
SORT1-201ENST00000256637 KMT2DO14686 5537 aa4.19□□□□□ -1.74
SORT1-201ENST00000256637 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
SORT1-201ENST00000256637 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
SORT1-201ENST00000256637 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
SORT1-201ENST00000256637 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
SORT1-201ENST00000256637 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
SORT1-201ENST00000256637 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
SORT1-201ENST00000256637 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
SORT1-201ENST00000256637 NEBP20929 6669 aa3.86□□□□□ -1.79
SORT1-201ENST00000256637 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
SORT1-201ENST00000256637 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
SORT1-201ENST00000256637 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
SORT1-201ENST00000256637 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
SORT1-201ENST00000256637 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SORT1-201ENST00000256637 USH2AO75445 5202 aa3.48□□□□□ -1.85
SORT1-201ENST00000256637 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
SORT1-201ENST00000256637 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
SORT1-201ENST00000256637 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
SORT1-201ENST00000256637 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
SORT1-201ENST00000256637 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
SORT1-201ENST00000256637 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
SORT1-201ENST00000256637 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
SORT1-201ENST00000256637 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
SORT1-201ENST00000256637 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
SORT1-201ENST00000256637 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
SORT1-201ENST00000256637 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
SORT1-201ENST00000256637 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
SORT1-201ENST00000256637 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
SORT1-201ENST00000256637 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
SORT1-201ENST00000256637 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
SORT1-201ENST00000256637 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
SORT1-201ENST00000256637 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
SORT1-201ENST00000256637 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
SORT1-201ENST00000256637 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
SORT1-201ENST00000256637 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SORT1-201ENST00000256637 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
SORT1-201ENST00000256637 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 68.1 ms