RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
TTC9-201ENST00000256367 MT1MQ8N339 61 aa7.01□□□□□ -1.29
TTC9-201ENST00000256367 LCE3EQ5T5B0 92 aa6.97□□□□□ -1.29
TTC9-201ENST00000256367 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
TTC9-201ENST00000256367 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
TTC9-201ENST00000256367 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
TTC9-201ENST00000256367 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
TTC9-201ENST00000256367 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
TTC9-201ENST00000256367 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
TTC9-201ENST00000256367 SYNE1Q8NF91 8797 aaKnown RBP6.72□□□□□ -1.33
TTC9-201ENST00000256367 MT3P25713 68 aa6.71□□□□□ -1.34
TTC9-201ENST00000256367 MT4P47944 62 aa6.67□□□□□ -1.34
TTC9-201ENST00000256367 MUC2Q02817 5179 aa6.6□□□□□ -1.35
TTC9-201ENST00000256367 KRTAP9-6A0A140TA67 174 aa6.58□□□□□ -1.36
TTC9-201ENST00000256367 MT1AP04731 61 aa6.48□□□□□ -1.37
TTC9-201ENST00000256367 PRM1P04553 51 aa6.42□□□□□ -1.38
TTC9-201ENST00000256367 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
TTC9-201ENST00000256367 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
TTC9-201ENST00000256367 KRTAP2-1Q9BYU5 128 aa6.32□□□□□ -1.4
TTC9-201ENST00000256367 LCE1AQ5T7P2 110 aa6.3□□□□□ -1.4
TTC9-201ENST00000256367 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
TTC9-201ENST00000256367 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
TTC9-201ENST00000256367 LCE1BQ5T7P3 118 aa6.28□□□□□ -1.4
TTC9-201ENST00000256367 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
TTC9-201ENST00000256367 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
TTC9-201ENST00000256367 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
TTC9-201ENST00000256367 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
TTC9-201ENST00000256367 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
TTC9-201ENST00000256367 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.42
TTC9-201ENST00000256367 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
TTC9-201ENST00000256367 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
TTC9-201ENST00000256367 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
TTC9-201ENST00000256367 USH2AO75445 5202 aa6□□□□□ -1.45
TTC9-201ENST00000256367 KRTAP6-2Q3LI66 62 aa5.99□□□□□ -1.45
TTC9-201ENST00000256367 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
TTC9-201ENST00000256367 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
TTC9-201ENST00000256367 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.48
TTC9-201ENST00000256367 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.48
TTC9-201ENST00000256367 KMT2DO14686 5537 aa5.66□□□□□ -1.5
TTC9-201ENST00000256367 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
TTC9-201ENST00000256367 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
TTC9-201ENST00000256367 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
TTC9-201ENST00000256367 SSPOA2VEC9 5147 aa5.46□□□□□ -1.54
TTC9-201ENST00000256367 NEBP20929 6669 aa5.36□□□□□ -1.55
TTC9-201ENST00000256367 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
TTC9-201ENST00000256367 LCE1CQ5T751 118 aa5.23□□□□□ -1.57
TTC9-201ENST00000256367 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
TTC9-201ENST00000256367 LCE1FQ5T754 118 aa5.23□□□□□ -1.57
TTC9-201ENST00000256367 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
TTC9-201ENST00000256367 MUC19Q7Z5P9 8384 aa5.13□□□□□ -1.59
TTC9-201ENST00000256367 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
TTC9-201ENST00000256367 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
TTC9-201ENST00000256367 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
TTC9-201ENST00000256367 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
TTC9-201ENST00000256367 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
TTC9-201ENST00000256367 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.66
TTC9-201ENST00000256367 GPR98Q8WXG9 6306 aa4.65□□□□□ -1.66
TTC9-201ENST00000256367 KRTAP4-4Q9BYR3 166 aa4.43□□□□□ -1.7
TTC9-201ENST00000256367 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
TTC9-201ENST00000256367 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
TTC9-201ENST00000256367 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
TTC9-201ENST00000256367 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
TTC9-201ENST00000256367 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
TTC9-201ENST00000256367 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
TTC9-201ENST00000256367 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
TTC9-201ENST00000256367 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
TTC9-201ENST00000256367 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
TTC9-201ENST00000256367 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
TTC9-201ENST00000256367 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
TTC9-201ENST00000256367 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
TTC9-201ENST00000256367 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
TTC9-201ENST00000256367 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
TTC9-201ENST00000256367 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
TTC9-201ENST00000256367 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
TTC9-201ENST00000256367 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
TTC9-201ENST00000256367 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
TTC9-201ENST00000256367 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 74.9 ms