RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 MT1EP04732 61 aa5.88□□□□□ -1.47
SLC52A1-201ENST00000254853 KRTAP2-3P0C7H8 128 aa5.88□□□□□ -1.47
SLC52A1-201ENST00000254853 KRTAP2-4Q9BYR9 128 aa5.88□□□□□ -1.47
SLC52A1-201ENST00000254853 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
SLC52A1-201ENST00000254853 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.48
SLC52A1-201ENST00000254853 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
SLC52A1-201ENST00000254853 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
SLC52A1-201ENST00000254853 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
SLC52A1-201ENST00000254853 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
SLC52A1-201ENST00000254853 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
SLC52A1-201ENST00000254853 MACF1Q9UPN3 7388 aaKnown RBP5.59□□□□□ -1.52
SLC52A1-201ENST00000254853 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
SLC52A1-201ENST00000254853 MT1GP13640 62 aa5.53□□□□□ -1.52
SLC52A1-201ENST00000254853 MT1MQ8N339 61 aa5.49□□□□□ -1.53
SLC52A1-201ENST00000254853 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
SLC52A1-201ENST00000254853 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
SLC52A1-201ENST00000254853 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
SLC52A1-201ENST00000254853 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
SLC52A1-201ENST00000254853 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
SLC52A1-201ENST00000254853 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
SLC52A1-201ENST00000254853 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
SLC52A1-201ENST00000254853 NEBP20929 6669 aa5.15□□□□□ -1.58
SLC52A1-201ENST00000254853 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
SLC52A1-201ENST00000254853 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
SLC52A1-201ENST00000254853 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
SLC52A1-201ENST00000254853 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
SLC52A1-201ENST00000254853 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
SLC52A1-201ENST00000254853 MT1AP04731 61 aa4.97□□□□□ -1.61
SLC52A1-201ENST00000254853 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
SLC52A1-201ENST00000254853 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
SLC52A1-201ENST00000254853 SPRR2EP22531 72 aa4.89□□□□□ -1.63
SLC52A1-201ENST00000254853 SPRR2BP35325 72 aa4.89□□□□□ -1.63
SLC52A1-201ENST00000254853 SPRR2AP35326 72 aa4.89□□□□□ -1.63
SLC52A1-201ENST00000254853 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
SLC52A1-201ENST00000254853 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
SLC52A1-201ENST00000254853 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.64
SLC52A1-201ENST00000254853 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
SLC52A1-201ENST00000254853 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
SLC52A1-201ENST00000254853 SPRR2DP22532 72 aa4.72□□□□□ -1.65
SLC52A1-201ENST00000254853 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
SLC52A1-201ENST00000254853 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
SLC52A1-201ENST00000254853 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.66
SLC52A1-201ENST00000254853 PRM1P04553 51 aa4.64□□□□□ -1.67
SLC52A1-201ENST00000254853 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
SLC52A1-201ENST00000254853 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
SLC52A1-201ENST00000254853 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
SLC52A1-201ENST00000254853 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
SLC52A1-201ENST00000254853 MT3P25713 68 aa4.42□□□□□ -1.7
SLC52A1-201ENST00000254853 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
SLC52A1-201ENST00000254853 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.73
SLC52A1-201ENST00000254853 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
SLC52A1-201ENST00000254853 MT4P47944 62 aa4.17□□□□□ -1.74
SLC52A1-201ENST00000254853 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
SLC52A1-201ENST00000254853 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
SLC52A1-201ENST00000254853 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
SLC52A1-201ENST00000254853 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
SLC52A1-201ENST00000254853 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
SLC52A1-201ENST00000254853 AHNAK2Q8IVF2 5795 aa3.94□□□□□ -1.78
SLC52A1-201ENST00000254853 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
SLC52A1-201ENST00000254853 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
SLC52A1-201ENST00000254853 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
SLC52A1-201ENST00000254853 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.84
SLC52A1-201ENST00000254853 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
SLC52A1-201ENST00000254853 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
SLC52A1-201ENST00000254853 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
SLC52A1-201ENST00000254853 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
SLC52A1-201ENST00000254853 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
SLC52A1-201ENST00000254853 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
SLC52A1-201ENST00000254853 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
SLC52A1-201ENST00000254853 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
SLC52A1-201ENST00000254853 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SLC52A1-201ENST00000254853 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
SLC52A1-201ENST00000254853 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
SLC52A1-201ENST00000254853 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SLC52A1-201ENST00000254853 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SLC52A1-201ENST00000254853 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
SLC52A1-201ENST00000254853 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 75.5 ms