RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
EFR3A-201ENST00000254624 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
EFR3A-201ENST00000254624 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
EFR3A-201ENST00000254624 MT3P25713 68 aa5.65□□□□□ -1.5
EFR3A-201ENST00000254624 KRTAP9-6A0A140TA67 174 aa5.64□□□□□ -1.51
EFR3A-201ENST00000254624 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
EFR3A-201ENST00000254624 MT4P47944 62 aa5.55□□□□□ -1.52
EFR3A-201ENST00000254624 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
EFR3A-201ENST00000254624 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
EFR3A-201ENST00000254624 HMCN2Q8NDA2 5059 aa5.49□□□□□ -1.53
EFR3A-201ENST00000254624 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
EFR3A-201ENST00000254624 MT1AP04731 61 aa5.43□□□□□ -1.54
EFR3A-201ENST00000254624 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
EFR3A-201ENST00000254624 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
EFR3A-201ENST00000254624 KRTAP20-1Q3LI63 56 aa5.3□□□□□ -1.56
EFR3A-201ENST00000254624 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
EFR3A-201ENST00000254624 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
EFR3A-201ENST00000254624 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
EFR3A-201ENST00000254624 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
EFR3A-201ENST00000254624 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
EFR3A-201ENST00000254624 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
EFR3A-201ENST00000254624 PRM1P04553 51 aa5.2□□□□□ -1.58
EFR3A-201ENST00000254624 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
EFR3A-201ENST00000254624 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
EFR3A-201ENST00000254624 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
EFR3A-201ENST00000254624 MUC2Q02817 5179 aa5.11□□□□□ -1.59
EFR3A-201ENST00000254624 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
EFR3A-201ENST00000254624 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
EFR3A-201ENST00000254624 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
EFR3A-201ENST00000254624 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
EFR3A-201ENST00000254624 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
EFR3A-201ENST00000254624 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
EFR3A-201ENST00000254624 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
EFR3A-201ENST00000254624 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.61
EFR3A-201ENST00000254624 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
EFR3A-201ENST00000254624 USH2AO75445 5202 aa4.74□□□□□ -1.65
EFR3A-201ENST00000254624 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
EFR3A-201ENST00000254624 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
EFR3A-201ENST00000254624 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
EFR3A-201ENST00000254624 NEBP20929 6669 aa4.43□□□□□ -1.7
EFR3A-201ENST00000254624 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
EFR3A-201ENST00000254624 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
EFR3A-201ENST00000254624 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
EFR3A-201ENST00000254624 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
EFR3A-201ENST00000254624 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
EFR3A-201ENST00000254624 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
EFR3A-201ENST00000254624 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
EFR3A-201ENST00000254624 KMT2DO14686 5537 aa4.25□□□□□ -1.73
EFR3A-201ENST00000254624 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
EFR3A-201ENST00000254624 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
EFR3A-201ENST00000254624 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
EFR3A-201ENST00000254624 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
EFR3A-201ENST00000254624 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
EFR3A-201ENST00000254624 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
EFR3A-201ENST00000254624 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
EFR3A-201ENST00000254624 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
EFR3A-201ENST00000254624 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
EFR3A-201ENST00000254624 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
EFR3A-201ENST00000254624 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
EFR3A-201ENST00000254624 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
EFR3A-201ENST00000254624 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
EFR3A-201ENST00000254624 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
EFR3A-201ENST00000254624 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
EFR3A-201ENST00000254624 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
EFR3A-201ENST00000254624 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
EFR3A-201ENST00000254624 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
EFR3A-201ENST00000254624 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
EFR3A-201ENST00000254624 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
EFR3A-201ENST00000254624 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
EFR3A-201ENST00000254624 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
EFR3A-201ENST00000254624 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
EFR3A-201ENST00000254624 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
EFR3A-201ENST00000254624 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
EFR3A-201ENST00000254624 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
EFR3A-201ENST00000254624 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
EFR3A-201ENST00000254624 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
EFR3A-201ENST00000254624 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms