RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
VPS25-201ENST00000253794 MT1LQ93083 61 aa5.05□□□□□ -1.6
VPS25-201ENST00000253794 MT1GP13640 62 aa5.03□□□□□ -1.6
VPS25-201ENST00000253794 SPRR2DP22532 72 aa5.02□□□□□ -1.61
VPS25-201ENST00000253794 PRO0628Q9UI54 55 aa5.01□□□□□ -1.61
VPS25-201ENST00000253794 PMAIP1Q13794 54 aa5□□□□□ -1.61
VPS25-201ENST00000253794 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
VPS25-201ENST00000253794 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
VPS25-201ENST00000253794 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
VPS25-201ENST00000253794 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
VPS25-201ENST00000253794 MT1MQ8N339 61 aa4.94□□□□□ -1.62
VPS25-201ENST00000253794 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
VPS25-201ENST00000253794 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
VPS25-201ENST00000253794 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
VPS25-201ENST00000253794 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
VPS25-201ENST00000253794 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
VPS25-201ENST00000253794 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
VPS25-201ENST00000253794 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
VPS25-201ENST00000253794 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
VPS25-201ENST00000253794 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
VPS25-201ENST00000253794 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
VPS25-201ENST00000253794 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
VPS25-201ENST00000253794 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
VPS25-201ENST00000253794 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
VPS25-201ENST00000253794 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
VPS25-201ENST00000253794 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
VPS25-201ENST00000253794 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
VPS25-201ENST00000253794 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
VPS25-201ENST00000253794 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
VPS25-201ENST00000253794 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
VPS25-201ENST00000253794 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
VPS25-201ENST00000253794 MT4P47944 62 aa4.33□□□□□ -1.72
VPS25-201ENST00000253794 MT1AP04731 61 aa4.31□□□□□ -1.72
VPS25-201ENST00000253794 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
VPS25-201ENST00000253794 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
VPS25-201ENST00000253794 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
VPS25-201ENST00000253794 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
VPS25-201ENST00000253794 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
VPS25-201ENST00000253794 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
VPS25-201ENST00000253794 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
VPS25-201ENST00000253794 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
VPS25-201ENST00000253794 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
VPS25-201ENST00000253794 AHNAK2Q8IVF2 5795 aa4.03□□□□□ -1.76
VPS25-201ENST00000253794 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
VPS25-201ENST00000253794 MT3P25713 68 aa3.92□□□□□ -1.78
VPS25-201ENST00000253794 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
VPS25-201ENST00000253794 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
VPS25-201ENST00000253794 H3BS24 57 aa3.77□□□□□ -1.81
VPS25-201ENST00000253794 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
VPS25-201ENST00000253794 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
VPS25-201ENST00000253794 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
VPS25-201ENST00000253794 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
VPS25-201ENST00000253794 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
VPS25-201ENST00000253794 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
VPS25-201ENST00000253794 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
VPS25-201ENST00000253794 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
VPS25-201ENST00000253794 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
VPS25-201ENST00000253794 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
VPS25-201ENST00000253794 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
VPS25-201ENST00000253794 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
VPS25-201ENST00000253794 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
VPS25-201ENST00000253794 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
VPS25-201ENST00000253794 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
VPS25-201ENST00000253794 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
VPS25-201ENST00000253794 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
VPS25-201ENST00000253794 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
VPS25-201ENST00000253794 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
VPS25-201ENST00000253794 INE1O15225 51 aa2.95□□□□□ -1.94
VPS25-201ENST00000253794 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
VPS25-201ENST00000253794 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
VPS25-201ENST00000253794 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
VPS25-201ENST00000253794 PRM1P04553 51 aa2.7□□□□□ -1.98
VPS25-201ENST00000253794 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
VPS25-201ENST00000253794 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
VPS25-201ENST00000253794 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
VPS25-201ENST00000253794 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
VPS25-201ENST00000253794 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 115.4 ms